Jatropha Genome Database

JcCB0960711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0960711.10 - phase: 0 /pseudo
         (208 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003541 similarity to receptor protein kinase, putative         273   3e-74
29948.m000687 similarity to receptor protein kinase, putative         193   6e-50
29948.m000688 hypothetical protein                                    177   2e-45
30122.m000356 LysM domain GPI-anchored protein 2 precursor, puta...    55   2e-08
30170.m013728 kinase, putative                                         50   7e-07

>29842.m003541 similarity to receptor protein kinase, putative
          Length = 607

 Score =  273 bits (699), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/187 (70%), Positives = 151/187 (80%), Gaps = 1/187 (0%)

Query: 21  KAEAKCKSGCELSLASYNVWEGVNLTYISNLFXPNHPSNSPFTIPNVTNQDSILVDTRLN 80
           +A+AKCK+GC+L+ ASYN    VNLT+IS LF  + P    +  P+V+NQDSIL  TR+N
Sbjct: 19  RAQAKCKTGCDLAFASYNTSPRVNLTFISTLFSKSLPEILRYN-PHVSNQDSILAGTRIN 77

Query: 81  IPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIPDYVP 140
           +PFSCDCLNGDFLGHTF YTTQ GDTYD+IA  AFANLTTEDWVHRVNIY TTRIPD  P
Sbjct: 78  VPFSCDCLNGDFLGHTFIYTTQTGDTYDKIANIAFANLTTEDWVHRVNIYDTTRIPDDAP 137

Query: 141 INVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFSEGSG 200
           INVT+NCSCGDKRVSK+YGLF T+PL   +N SSLA  SGV  DLLQ YNPG NFS GSG
Sbjct: 138 INVTLNCSCGDKRVSKNYGLFATFPLQPGENSSSLATASGVSADLLQSYNPGVNFSAGSG 197

Query: 201 IIFVPAK 207
           I++VPAK
Sbjct: 198 IVYVPAK 204


>29948.m000687 similarity to receptor protein kinase, putative
          Length = 603

 Score =  193 bits (490), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 6/192 (3%)

Query: 22  AEAKCKSGCELSLASYNVWEGVNLTYISNLFXPNHPSNSPFTI-----PNVTNQDSILVD 76
           A +KC  GC+L+ ASY VW+  N ++I+ +   +   +SP TI       V+N+DS+   
Sbjct: 22  AHSKCTRGCDLAFASYYVWQEANTSFIAEVM-KSSILDSPDTIVTYNSDQVSNKDSLPSF 80

Query: 77  TRLNIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIP 136
            R+N+PF C C++G+FLGH F Y  + GDTY  +A+  ++NLTT  W+ ++N Y  T IP
Sbjct: 81  IRINLPFPCGCIDGEFLGHVFNYDVRSGDTYLVVAEKYYSNLTTVSWLSQLNSYPPTNIP 140

Query: 137 DYVPINVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFS 196
           D   +NVTVNCSCG+ ++SKDYGLF TYPL   D+L S+A ++ +R DLLQ YNPG NFS
Sbjct: 141 DTGILNVTVNCSCGNSQISKDYGLFITYPLRPEDSLESIANQTSIRADLLQSYNPGVNFS 200

Query: 197 EGSGIIFVPAKG 208
            GSG++++P +G
Sbjct: 201 RGSGLVYIPGQG 212


>29948.m000688 hypothetical protein
          Length = 236

 Score =  177 bits (450), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/187 (46%), Positives = 119/187 (63%), Gaps = 4/187 (2%)

Query: 25  KCKSGCELSLASYNVWEGVNLTYISNLFXPNHPSNSPFTIP----NVTNQDSILVDTRLN 80
           +C+ GC+L+ ASY V  G  L++I+  F  +   ++   +      + +QD +   TR+N
Sbjct: 34  RCERGCDLAYASYYVLPGATLSFIAEYFSSDILQSADTIVDYNKDQIPDQDRLPALTRIN 93

Query: 81  IPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIPDYVP 140
           IPFSCDC+ G+FLGH F Y  + G TY  +A   +ANLT   W+ + N Y    IPD   
Sbjct: 94  IPFSCDCVGGEFLGHVFHYNLRSGVTYGALANETYANLTDVPWLKKSNSYPENNIPDSGV 153

Query: 141 INVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFSEGSG 200
           +NV VNCSCGD  VSKDYGLF TYPL   D++ S+A E+ V  DLLQRYN G +FS GSG
Sbjct: 154 LNVAVNCSCGDGSVSKDYGLFVTYPLRIGDSVESIAREANVSVDLLQRYNEGADFSSGSG 213

Query: 201 IIFVPAK 207
           +++VP+K
Sbjct: 214 LVYVPSK 220


>30122.m000356 LysM domain GPI-anchored protein 2 precursor,
           putative
          Length = 361

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 13/141 (9%)

Query: 59  NSPFTIPNVTNQDSILVDTRLNIPFSCDCLNGDFLGHTFK-YTTQPGDTYDRIAKYAFAN 117
           N P + P+    +++   T + IPF C C NG  + ++   Y  QPGD  D IA+  F+ 
Sbjct: 71  NLPLSTPS---NNNVPAQTTIKIPFPCICSNGTGISNSKPIYIVQPGDILDHIAREVFSG 127

Query: 118 LTTEDWVHRVN-IYKTTRIPDYVPINVTVNCSC---GDKRVSKDYGLFTTYPLGAADNLS 173
           L T   +  VN I     I     + + + CSC   G +RV   YG    + + +   L 
Sbjct: 128 LVTFQEIAAVNSIPDANVIEAGQKLRIPLPCSCDEVGGERVVH-YG----HIVESGSTLE 182

Query: 174 SLAEESGVRPDLLQRYNPGKN 194
            +AEE G   D+L   N G N
Sbjct: 183 VIAEEYGTSKDILMSLNNGVN 203


>30170.m013728 kinase, putative
          Length = 634

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)

Query: 72  SILVDTRLNIPFSCDCLNGDFLGHTFKYTTQ-PGDTYDRIAKYAFANLTTEDWVHRVNIY 130
           SI   ++L IP +C C  G F  H   YT +   +TY  +A   +  L+T   +   N Y
Sbjct: 101 SIPPQSQLFIPVNCSCFGGQFYQHNASYTLKFSSETYFSVANDTYQGLSTCQALMSQNPY 160

Query: 131 KTTRIPDYVPINVTVNCSC-GDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPD 184
               +   + + V + C+C    + +  +    TY +   D +SS+AE  GVRP 
Sbjct: 161 GDRNLSVGMRLQVPLRCACPTSNQTALGFRYLLTYMVTWGDTISSIAELFGVRPQ 215