Jatropha Genome Database

JcCB0940751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0940751.10 + phase: 0 /pseudo/partial
         (247 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29630.m000832 ubiquitin-protein ligase, putative                      145   1e-35
29206.m000146 ubiquitin-protein ligase, putative                       82   2e-16
28962.m000442 conserved hypothetical protein                           72   3e-13
28962.m000441 conserved hypothetical protein                           69   2e-12
29206.m000142 conserved hypothetical protein                           64   7e-11
27934.m000195 Transitional endoplasmic reticulum ATPase, putative      57   6e-09
29642.m000277 conserved hypothetical protein                           57   9e-09
29822.m003457 conserved hypothetical protein                           56   2e-08
30026.m001473 conserved hypothetical protein                           53   1e-07
29726.m003926 conserved hypothetical protein                           51   4e-07
29751.m001829 ubiquitin-protein ligase, putative                       51   6e-07
29726.m003927 ubiquitin-protein ligase, putative                       50   1e-06
29726.m003924 conserved hypothetical protein                           49   2e-06
29642.m000276 conserved hypothetical protein                           48   5e-06
29904.m002893 ubiquitin-protein ligase, putative                       47   6e-06
29993.m001061 ubiquitin-protein ligase, putative                       47   8e-06

>29630.m000832 ubiquitin-protein ligase, putative
          Length = 414

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 86/112 (76%)

Query: 111 FLLLDAQNKGNNMWSAWSFGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAW 170
           FL +DA  KG ++W AW+FGFG D + DDYKV+RLGQYLD S   FET+T+V +LK N+W
Sbjct: 130 FLRMDASVKGKSVWGAWAFGFGCDSVHDDYKVIRLGQYLDFSLQQFETDTMVYSLKSNSW 189

Query: 171 REIPGMSYMLGIDQKMGVLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFRE 222
           R+I GMS ++G DQKMGVLVG+ALHWL S   +L+NP+ IV  ++ VE FRE
Sbjct: 190 RKIDGMSCIIGFDQKMGVLVGEALHWLASRDRILLNPDVIVALNLGVEDFRE 241


>29206.m000146 ubiquitin-protein ligase, putative
          Length = 389

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAWREIPGMSYMLGIDQKMGV 188
           FGFGYD  +DDYK+VR+ Q+  +    FE+E  V +L+ N+WR I  M Y +    + G+
Sbjct: 142 FGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGI 201

Query: 189 LVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAPRIFVDQNA 234
               ALHWLVS        + IV  D+ VE +  VP P  FVD N 
Sbjct: 202 YANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPE-FVDMNC 246


>28962.m000442 conserved hypothetical protein
          Length = 427

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 25/138 (18%)

Query: 115 DAQNKGNNMWSAWSFGFGYDPISDDYKVVRLGQYLDLSD-------GHFETETLVCNLKD 167
           D QNK     S   +GFGYD ++DDYKVVR+ Q +D          G  ETE  +CN+K 
Sbjct: 131 DEQNK----VSLTGYGFGYDCVNDDYKVVRIAQKIDAEPRINNGNLGFLETEMSICNVKT 186

Query: 168 NAWREIPGMSYMLGIDQKMGVLVGDALHWLV-------SLKFMLINPNQIVGFDVRVEQF 220
              + +  M Y   ++  +GVL   ALHWL+       SLK  L     IVG+D+  ++F
Sbjct: 187 RVLKVV-KMPYFTLVND-LGVLACGALHWLMGKYNDVTSLKKKL-----IVGYDLGTDEF 239

Query: 221 REVPAPRIFVDQNAYASL 238
           RE+  P      N   ++
Sbjct: 240 RELSQPEFLNHDNCRKNI 257


>28962.m000441 conserved hypothetical protein
          Length = 389

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 15/112 (13%)

Query: 129 FGFGYDPISDDYKVVRLGQYL--------------DLSDGHFETETLVCNLKDNAWREIP 174
           +GFGYD ++DDYKVVR+ +                + + G  E E ++C +K    R + 
Sbjct: 152 YGFGYDHVADDYKVVRVAEISYSHQRVVNADNGIGNSNAGFLEYEMVICYVKTGVVR-VL 210

Query: 175 GMSYMLGIDQKMGVLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAP 226
            M Y     QK+GVL   ALHW++     L +PN IVG+++   +F EVP P
Sbjct: 211 KMPYHTRTSQKVGVLADGALHWVMGRYDDLSSPNVIVGYNLGTCEFLEVPQP 262


>29206.m000142 conserved hypothetical protein
          Length = 395

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 14/112 (12%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDG----HFETETLVCNLKDNAWREIPGMSYMLGIDQ 184
           +GFG+D +S+DY+++R+  ++   D      +E +  V +LK+++W+ I G+ Y L    
Sbjct: 144 YGFGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIKGLPYYLRFLY 203

Query: 185 K----------MGVLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAP 226
           K           GV   +ALHW++     L   N I+ FD+  E F++VP P
Sbjct: 204 KPFFQVLHRRGYGVFACNALHWVMPHWPELGVNNSIIAFDIVNETFQQVPQP 255


>27934.m000195 Transitional endoplasmic reticulum ATPase, putative
          Length = 1029

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDG---HFETETLVCNLKDNAWREIPGMSYMLGIDQK 185
           +GFGYD  +DDYKV++    + + +    H E+   V +L+ N+WR I   S        
Sbjct: 762 YGFGYDASADDYKVLKGHTRVVVKEAGYEHHESIVKVFSLRTNSWRTIQDSSPSYLPYPL 821

Query: 186 MGVLVGDALHWLVSLKFMLINPNQ--IVGFDVRVEQFREVPAPR 227
            G+ V  ALHW        I P+   I  FD+  E+F+EVP P+
Sbjct: 822 PGIFVHGALHWSARHG---IEPDYSLIASFDLAAEKFKEVPEPK 862


>29642.m000277 conserved hypothetical protein
          Length = 263

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 14/109 (12%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHF----------ETETLVCNLKDNAWREIPGMSY 178
           FGFG+ P + +YKVV++  Y +   G +          ++E  +  +    WR +  MSY
Sbjct: 20  FGFGFHPKTQEYKVVKIVYYRNGHSGGYPRATRRQFYPQSEVQILTVGSCEWRSLGKMSY 79

Query: 179 MLGIDQKMGVLVGDALHWLVSLKFMLINP-NQIVGFDVRVEQFREVPAP 226
            L + ++   LV   LHW+   +    NP  ++V  D+  EQFREVP P
Sbjct: 80  QL-VRRQSEALVNGRLHWVSRPR--RYNPARRLVSLDLVDEQFREVPKP 125


>29822.m003457 conserved hypothetical protein
          Length = 401

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 129 FGFGYDPISDDYKVVRLGQYL----DLSDGHFETETLVCNLKDNAWREIPGMSYMLGIDQ 184
           FGFG+ P  ++YKV+++  Y     D S G  E   L  N     WR I  + Y L    
Sbjct: 161 FGFGFHPKMEEYKVIKIVYYKQGNNDFSGGAPEAFVLTANTP--TWRNIGKIGYDLN-GP 217

Query: 185 KMGVLVGDALHWLV-SLKFMLINPNQIVGFDVRVEQFREVPAP 226
               LV + LHWL   L    +   +IV FD+  EQF++VP P
Sbjct: 218 TSEALVNEKLHWLTFCLVHEEVKYREIVSFDLETEQFQDVPRP 260


>30026.m001473 conserved hypothetical protein
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAW-REIPGMSYMLGIDQKMG 187
           FGFGYD  +D+YK+V +   L       ET   V NLK+  W R+     Y     +   
Sbjct: 177 FGFGYDHFNDNYKLVEVSSSL----ASEETSVDVYNLKERCWERKDSQFPYKFLWHRPGT 232

Query: 188 VLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAP 226
            L     HW+V  +  + N   ++ FD+  E+F+EVP P
Sbjct: 233 TLANGVPHWIVRRR--VNNEKVVISFDLGEEKFKEVPLP 269


>29726.m003926 conserved hypothetical protein
          Length = 403

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 128 SFGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAWREIPGMSYMLGIDQKMG 187
           +FGFGYD   DDYKVVR+   +  S         V +L+ ++WR+I    +        G
Sbjct: 196 AFGFGYDSTRDDYKVVRINAGVASS---------VYSLRTDSWRKIDNFCHDFCF-HHSG 245

Query: 188 VLVGDALHWLVSLKFMLINPNQIV-GFDVRVEQFREVPAPRIFVDQNAY 235
           V +  A+HW+   +  + +   ++  FD+  E F ++PAP +  D + +
Sbjct: 246 VFLRGAIHWMAINREEVDDEYYVISAFDMEKELFWDMPAPDMEDDDSEF 294


>29751.m001829 ubiquitin-protein ligase, putative
          Length = 358

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 14/116 (12%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAW---REIPGMSYMLGIDQK 185
           FG GYD  SDDYKVVR+ +     DG       + +L+ N+W    + P  +Y       
Sbjct: 148 FGLGYDAASDDYKVVRIQKCRSKKDG-----VGIYSLRSNSWTRLHDFPCDNYEFDW-TA 201

Query: 186 MGVLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAPRIFVDQNAYASLEVV 241
           MG  V   L+WL + +   ++   I+ FD+  E+F  +  P  +  Q  Y  L VV
Sbjct: 202 MGKHVSGTLYWLCAKETYSVS---IIAFDILTEKFHALQIPAQYSRQ--YNKLHVV 252


>29726.m003927 ubiquitin-protein ligase, putative
          Length = 358

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 14/100 (14%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAWREIPGMSY-MLGIDQKMG 187
           +GFGY    +DYK+V++                V ++K+N+WR + G  Y +L +D   G
Sbjct: 149 YGFGYAHSINDYKLVKIS---------CRGCVFVYSVKENSWRSVGGFPYSILALDP--G 197

Query: 188 VLVGDALHWLVSLKFMLINPNQIVG-FDVRVEQFREVPAP 226
           + +  A+HW+VS +      +QI+G FD+  E+F +VP P
Sbjct: 198 IQLNGAIHWVVS-RSKDSTKSQIIGAFDLVEEKFWDVPPP 236


>29726.m003924 conserved hypothetical protein
          Length = 316

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 12/105 (11%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDG---HFETETLVCNLKDNAWREIPGMSYMLGIDQK 185
           FGFGYD   DDYKVV +  + + +      +E+   VC L+ N WR      Y +  D  
Sbjct: 97  FGFGYDSEIDDYKVVAVFCFQNKNSSVGFGYESIVKVCTLRTNCWRRTGSFGYGVPYDVS 156

Query: 186 MGVLVGDALHWLVSLK----FMLINPNQIVGFDVRVEQFREVPAP 226
            G  V   L+W V  +     M I    IV FD++ E ++EV  P
Sbjct: 157 -GKYVNCTLNWPVMSEGDSGLMWI----IVSFDIKRETYKEVMQP 196


>29642.m000276 conserved hypothetical protein
          Length = 410

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 14/109 (12%)

Query: 130 GFGYDPISDDYKVVRLGQYLDLSD------------GHFETETLVCNLKDNAWREIPGMS 177
           GFG+   + +YKVVR+  Y +  +               E + L        WR     S
Sbjct: 166 GFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRSKGETS 225

Query: 178 YMLGIDQKMGVLVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAP 226
           Y L +     V+V   LHWL S ++   +  +++ FD+  EQFREVP P
Sbjct: 226 YQL-LGNPSHVVVNGRLHWL-SCRYRNQSLRRLISFDLADEQFREVPCP 272


>29904.m002893 ubiquitin-protein ligase, putative
          Length = 406

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 130 GFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAWREIPGMSYMLGIDQKMGVL 189
           G GY+  +DDY VV   ++ D  DG+ ET   +  LK+N WR+I  +        + G+ 
Sbjct: 195 GIGYNFSTDDYGVVFASRFTD--DGNEETTVELYTLKNNTWRKIEDVDSTPEPSGRSGIF 252

Query: 190 VGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPA-PRIFVDQNAYASL 238
               L+WL            IV FD+  ++F+EV + PR F      A+L
Sbjct: 253 WNGGLYWLKVKGSDCEKVYIIVSFDMVEKKFKEVLSLPRHFDPSRYKANL 302


>29993.m001061 ubiquitin-protein ligase, putative
          Length = 369

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 129 FGFGYDPISDDYKVVRLGQYLDLSDGHFETETLVCNLKDNAWREIPGMSYMLGIDQKMGV 188
           +GFGYD   DDYK+VR       ++   E    V NLK N WR I  +   +   Q   +
Sbjct: 149 YGFGYDSKLDDYKIVRGASSASCNEVQME----VFNLKGNRWRAIQNLHCNVRF-QGSAI 203

Query: 189 LVGDALHWLVSLKFMLINPNQIVGFDVRVEQFREVPAPRIFVDQNAYASLEVV 241
            +   LHWLV     L     IV  D+  E+F E+     +V +N    L+V+
Sbjct: 204 ALNGILHWLVD---QLNEGLMIVSLDLAEEKFLEMVVLPDYVTENWGTELKVL 253