Jatropha Genome Database

JcCB0902161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0902161.10 + phase: 0 /partial
         (93 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003939 mads box protein, putative                              179   2e-46
30174.m009079 mads box protein, putative                              152   2e-38
29790.m000814 mads box protein, putative                              115   4e-27
30174.m009080 mads box protein, putative                               83   3e-17
30174.m008934 mads box protein, putative                               75   5e-15
29790.m000813 mads box protein, putative                               74   2e-14
29929.m004629 mads box protein, putative                               72   6e-14
30138.m003941 mads box protein, putative                               71   1e-13
29804.m001536 mads box protein, putative                               62   4e-11
28333.m000571 mads box protein, putative                               61   1e-10
29596.m000699 mads box protein, putative                               60   3e-10
30026.m001501 mads box protein, putative                               57   1e-09
30174.m008936 mads box protein, putative                               55   1e-08
30170.m013818 mads box protein, putative                               54   1e-08
30147.m014137 mads box protein, putative                               53   4e-08
30190.m011098 mads box protein, putative                               50   3e-07
30147.m014133 mads box protein, putative                               47   1e-06

>30138.m003939 mads box protein, putative
          Length = 244

 Score =  179 bits (455), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/93 (92%), Positives = 92/93 (98%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           MERILERYERYSYAERQL+ATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGE+LD+L+L
Sbjct: 63  MERILERYERYSYAERQLLATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEELDTLTL 122

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           K+LQNLEQQIDSALKH+RSRKNQ MYESISELQ
Sbjct: 123 KDLQNLEQQIDSALKHVRSRKNQLMYESISELQ 155


>30174.m009079 mads box protein, putative
          Length = 180

 Score =  152 bits (385), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          MERILERYERYSYAERQLVATD  +  +WTLE+ +LKA+VE+LQRN RH++GEDLDSL+L
Sbjct: 1  MERILERYERYSYAERQLVATDLNSQENWTLEYNRLKAKVELLQRNHRHYLGEDLDSLTL 60

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          KELQNLEQQ+D+ALKHIR+RKNQ M+ESISELQ
Sbjct: 61 KELQNLEQQLDTALKHIRTRKNQLMFESISELQ 93


>29790.m000814 mads box protein, putative
          Length = 188

 Score =  115 bits (288), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 74/93 (79%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          ME IL+RYER + AE+Q V  D+E  G+W LE+ KL AR+E+L+R+ R+F G+DL  +SL
Sbjct: 1  MEAILDRYERCASAEKQAVPNDSEKQGTWCLEYPKLVARIEILERSLRNFAGKDLGPMSL 60

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          +ELQ+LEQQID+ALK +RSRKNQ  +ES++ LQ
Sbjct: 61 RELQHLEQQIDTALKRVRSRKNQLYHESLAALQ 93


>30174.m009080 mads box protein, putative
          Length = 198

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 1/93 (1%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           M + +E+Y+R SY   +   +  +T  S+  E+ KLK+RVE LQR+QRHF+GEDL +L  
Sbjct: 22  MAKTIEKYQRCSYGALEANQSVHDTQNSYQ-EYLKLKSRVEALQRSQRHFLGEDLGNLGT 80

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           K+L+ LE Q+DS+LKH+R  K+  M + +S+LQ
Sbjct: 81  KDLEQLEHQLDSSLKHVRLTKSNFMLDQLSQLQ 113


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 75.5 bits (184), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 2/90 (2%)

Query: 3   RILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSLKE 62
           + LERY+R  +   Q  + + ET  +W  E  KLKA+ E LQR QRH +GEDL  LS+KE
Sbjct: 64  KTLERYQRCCFTP-QDNSIERETQ-NWYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKE 121

Query: 63  LQNLEQQIDSALKHIRSRKNQQMYESISEL 92
           LQNLE+Q++ AL   R RK Q M E + +L
Sbjct: 122 LQNLEKQLEGALALARQRKTQIMIEQMEDL 151


>29790.m000813 mads box protein, putative
          Length = 180

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          M + LERY++ SY   ++     E   S+  E+ KLK R E LQ+ QR+ +GEDL  LS 
Sbjct: 1  MLKTLERYQKCSYGAVEVNKPAKELESSYR-EYLKLKTRFESLQKTQRNLLGEDLGPLST 59

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          KEL+ LE+Q++S+LK +RS + Q M + +S+LQ
Sbjct: 60 KELEQLERQLESSLKLVRSTRTQFMLDQLSDLQ 92


>29929.m004629 mads box protein, putative
          Length = 182

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 1  MERILERYERYSY-AERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLS 59
          M + LERY++ +Y A    V+       S   E+ KLKAR E LQR+QR+ +GEDL  LS
Sbjct: 4  MLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLS 63

Query: 60 LKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           K+L++LE+Q+D +LK IRS + Q M + +++LQ
Sbjct: 64 SKDLESLERQLDMSLKQIRSTRTQYMLDQLTDLQ 97


>30138.m003941 mads box protein, putative
          Length = 166

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 49/62 (79%)

Query: 32 EHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISE 91
          E+ KLKARVEVLQR+QR+ +GEDL  L  KEL+ LE Q++++LKHIRS K Q + + +++
Sbjct: 15 EYLKLKARVEVLQRSQRNLLGEDLAPLDTKELEQLEHQLETSLKHIRSTKTQFILDQLTD 74

Query: 92 LQ 93
          LQ
Sbjct: 75 LQ 76


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           M  ++ERY +    ++QL+   +E    W  E A L+  ++ LQ + R  MGE+L  LS 
Sbjct: 89  MNSVIERYNKLKEEQQQLMNPASEIK-FWQREAASLRKELQYLQESHRQLMGEELSGLSA 147

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
           K+LQNLE Q++ +LK +R +K+Q + + I EL
Sbjct: 148 KDLQNLENQLEMSLKGVRMKKDQILTDEIREL 179


>28333.m000571 mads box protein, putative
          Length = 173

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
          M+ I+ERY +     +QL+   +E    W  E A L+ ++  LQ + R FMGE L  LS+
Sbjct: 1  MKSIIERYNKTKEEHQQLLNPTSEVK-FWQREAAVLRQQLHNLQESHRQFMGEQLYGLSV 59

Query: 61 KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
          K+LQ+LE Q++ +L+ IR++K Q + + I EL
Sbjct: 60 KDLQSLENQLEMSLRGIRTKKEQILTDEIQEL 91


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTLEHAKLKARVEVLQRNQRHFMGEDLDSLSL 60
           M+ I+ERY +      Q     +E    W  E A L+ +++ LQ N R  MGE+L  LS+
Sbjct: 62  MKSIIERYNKSKEENNQTGNPISEVK-FWQREAAMLRQQLQNLQENHRQMMGEELSGLSI 120

Query: 61  KELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
           KELQNLE +++ +L+ +R +K+Q + + I EL
Sbjct: 121 KELQNLEGRLEMSLRGVRMKKDQLLMDEIEEL 152


>30026.m001501 mads box protein, putative
          Length = 177

 Score = 57.4 bits (137), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 8/83 (9%)

Query: 19  VATDTETNGS--------WTLEHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQI 70
           V+TD+ T GS        +  E AKL+ ++  LQ + RH +GE L +L+LK+L+ LE ++
Sbjct: 24  VSTDSSTTGSVSEANAQFYQQEAAKLRVQIGNLQNSNRHMLGESLGALNLKDLKGLEGRL 83

Query: 71  DSALKHIRSRKNQQMYESISELQ 93
           +  +  IRS+KN+ ++  I  +Q
Sbjct: 84  EKGISRIRSKKNELLFAEIEYMQ 106


>30174.m008936 mads box protein, putative
          Length = 157

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 1  MERILERYERYSYAERQLVATDTETNGSWTL--EHAKLKARVEVLQRNQRHFMGEDLDSL 58
          M+  +ERY R+   E Q     T+ N    L  E   L  ++E+L+ ++R  +G+ L S 
Sbjct: 1  MQDTIERYRRH-VKEHQTNKKPTDENMQHQLKSEAGNLMKKIELLEVSKRKLLGQGLGSC 59

Query: 59 SLKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
          +L+ELQ +EQQ++ ++  IR+RKNQ   E I +L+
Sbjct: 60 NLEELQQIEQQLEKSVSSIRARKNQVFKEQIEQLK 94


>30170.m013818 mads box protein, putative
          Length = 287

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 1   MERILERYERYSYAERQLVATDTETNGSWTL-EHAKLKARVEVLQRNQRHFMGEDLDSLS 59
           ++  +ERY++ + ++    ++ TE N  +   E AKL+ ++++LQ + RH MG+ L SL+
Sbjct: 107 IKSTIERYKK-ACSDSSNTSSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLSSLT 165

Query: 60  LKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           +KEL+ LE +++  +  IRS+K++ +   I  LQ
Sbjct: 166 VKELKQLENRLERGITRIRSKKHELLLAEIEYLQ 199


>30147.m014137 mads box protein, putative
          Length = 154

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 32 EHAKLKARVEVLQRNQRHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISE 91
          E  +LK + E LQ  Q H +GE+L  LS+KELQ +E+Q+D  L   R RK Q + E + E
Sbjct: 10 EVTRLKTKYESLQCCQSHLLGEELGPLSVKELQKIEKQLDRTLSQARQRKTQLLVERMEE 69

Query: 92 L 92
          L
Sbjct: 70 L 70


>30190.m011098 mads box protein, putative
          Length = 154

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)

Query: 4  ILERYERYSYAERQLVATDTETNGSWTLEHAK-----LKARVEVLQRNQRHFMGEDLDSL 58
          I +  ERY    + L     +T    T +H K     L  ++E+L+ ++R  +G+ L+  
Sbjct: 5  IYKTIERYQKKAKDL-GISIKTVQECTSQHMKEDTFSLAKKIELLEVSKRKLLGDGLEPC 63

Query: 59 SLKELQNLEQQIDSALKHIRSRKNQQMYESISEL 92
          S+ ELQ LE Q++ +L  IR+RKNQ   E I +L
Sbjct: 64 SVDELQQLENQLERSLTRIRTRKNQLFGEKIEKL 97


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 17/102 (16%)

Query: 1   MERILERYERYSYAERQLVATDTETNGS---------WTLEHAKLKARVEVLQRNQRHFM 51
           M++ +ERY ++        A + +  GS          T E A L  ++E L+ +QR  +
Sbjct: 62  MQKTIERYRKH--------AKEVQAAGSVAKEQHVQELTEESAALVKKIEELEISQRKLL 113

Query: 52  GEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQ 93
           G+ L S S++ELQ +  Q++ +L +IRSRK Q   E + +L+
Sbjct: 114 GQGLSSCSIEELQEIHSQLERSLSNIRSRKVQLFKEQMEQLK 155