Jatropha Genome Database

JcCB0897541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0897541.10 + phase: 2 /pseudo/partial
         (423 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29900.m001612 ketol-acid reductoisomerase, chloroplast precursor...   687   0.0  
29646.m001077 ketol-acid reductoisomerase, chloroplast precursor...   665   0.0  

>29900.m001612 ketol-acid reductoisomerase, chloroplast precursor,
           putative
          Length = 594

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/384 (86%), Positives = 347/384 (90%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSFAEARAAGFTEE+GTLGDIWETIAGSDLVLLLISDAAQADN E
Sbjct: 148 AKSDIVVKIGLRKGSRSFAEARAAGFTEENGTLGDIWETIAGSDLVLLLISDAAQADNNE 207

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KIFSHMKPNSI                 DFPKNISVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 208 KIFSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 267

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGINSSFAVHQDVDGRA DVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAVHGV
Sbjct: 268 AGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGV 327

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VECLFRRYTE+GM+ED+AYKNTVE              MLAVYN+LS+EGKRDFETAYSA
Sbjct: 328 VECLFRRYTESGMSEDLAYKNTVECITGIVSKTISTKGMLAVYNALSEEGKRDFETAYSA 387

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           +YYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA
Sbjct: 388 SYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 447

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
            RP  DLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV
Sbjct: 448 VRPNGDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 507

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 508 SFMVDNCSTTARLGSRKWAPRFDY 531


>29646.m001077 ketol-acid reductoisomerase, chloroplast precursor,
           putative
          Length = 584

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/384 (83%), Positives = 343/384 (89%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSFAEAR+AGFTEE+GTLGDIWET++GSDLVLLLISDAAQADNYE
Sbjct: 138 AKSDIVVKIGLRKGSRSFAEARSAGFTEENGTLGDIWETVSGSDLVLLLISDAAQADNYE 197

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           K+FSHMKPNSI                 DFPKNISVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 198 KVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 257

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGINSSFAVHQDVDGRA DVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG+
Sbjct: 258 AGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI 317

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYTENGM+ED AYKNTVE              MLAVYNSLS+EGK+ FETAYSA
Sbjct: 318 VESLFRRYTENGMSEDEAYKNTVECITGIISKTISTQGMLAVYNSLSEEGKKQFETAYSA 377

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           +YYPCMDILYECYEDVA GSEIRSVVLAGRRFYE++GLPAFPMGKIDQTRMWKVGERVR+
Sbjct: 378 SYYPCMDILYECYEDVACGSEIRSVVLAGRRFYERDGLPAFPMGKIDQTRMWKVGERVRS 437

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           TR   DLGPL PFTAGV+VALMMAQIE+LRKKGHSYSEIINES+IE+VDSLNPFMHARGV
Sbjct: 438 TRAAGDLGPLDPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGV 497

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 498 SFMVDNCSTTARLGSRKWAPRFDY 521