Jatropha Genome Database

JcCB0890051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0890051.10 - phase: 0 /partial
         (206 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006130 f8k7.22 protein, putative                               386   e-108
28527.m000056 protein binding protein, putative                       237   3e-63
29648.m001966 protein binding protein, putative                        62   2e-10
29726.m003917 Speckle-type POZ protein, putative                       60   6e-10
30143.m001182 Speckle-type POZ protein, putative                       60   6e-10
29665.m000087 Speckle-type POZ protein, putative                       55   2e-08
30170.m014361 protein binding protein, putative                        55   2e-08
30072.m000949 BTB and MATH domain-containing protein, putative         55   3e-08
29844.m003359 protein binding protein, putative                        53   1e-07
29703.m001550 Speckle-type POZ protein, putative                       52   2e-07
29729.m002324 protein binding protein, putative                        47   5e-06

>29908.m006130 f8k7.22 protein, putative
          Length = 326

 Score =  386 bits (992), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/201 (91%), Positives = 193/201 (96%)

Query: 6   LSLSKTQGGEASSIWPSDGMMQSVSTQSTLRCLSRMLDEAIHADVTIHTADGTLRAHKAM 65
           + +    G EASSIWPSDGMMQ+VSTQSTLRCLSRMLDEAIHAD+TIHTADG LRAHKA+
Sbjct: 119 IKICALNGVEASSIWPSDGMMQTVSTQSTLRCLSRMLDEAIHADLTIHTADGILRAHKAI 178

Query: 66  LSASSPVFQSMFHHDLKEKESSTIYIEDMSMESCMSLLSYLYGTIKQEDFWKHRLALLGA 125
           LSASSPVFQSMFHH+LKEKESSTIYIEDMSMESCMSLLSYLYGTIKQEDFWKHRLALLGA
Sbjct: 179 LSASSPVFQSMFHHNLKEKESSTIYIEDMSMESCMSLLSYLYGTIKQEDFWKHRLALLGA 238

Query: 126 ANKYDIVDLKNACEESLLEDINSGNVLERLQEAWLYQLNKLKRGCLTYLFDFGKIYDVRE 185
           ANKYDI DLK+ACEESLLEDINSGNVLERLQEAWLYQL+KLK+GCLTYLFDFGKIYDVRE
Sbjct: 239 ANKYDISDLKDACEESLLEDINSGNVLERLQEAWLYQLDKLKKGCLTYLFDFGKIYDVRE 298

Query: 186 EMNNFFRQADRELMLEMFQEV 206
           EMNNFFRQADRELMLEMFQEV
Sbjct: 299 EMNNFFRQADRELMLEMFQEV 319


>28527.m000056 protein binding protein, putative
          Length = 248

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 113/201 (56%), Positives = 151/201 (75%), Gaps = 1/201 (0%)

Query: 6   LSLSKTQGGEASSIWPSDGMMQSVSTQSTLRCLSRMLDEAIHADVTIHTADGTLRAHKAM 65
           L  +   GGE  SIW + G+ +  S  + L CL RML E+IH D+TI+ +DG++ AH+A+
Sbjct: 42  LKTASPDGGEPCSIW-AGGVTKKQSNATALACLGRMLKESIHTDITIYASDGSIGAHRAV 100

Query: 66  LSASSPVFQSMFHHDLKEKESSTIYIEDMSMESCMSLLSYLYGTIKQEDFWKHRLALLGA 125
           L+A SPVF+SMF HDLKEKE STI I DMS+E+C + L+Y+YG+I+ E+F  HRLALL A
Sbjct: 101 LAARSPVFRSMFAHDLKEKELSTINISDMSLEACQAFLNYIYGSIQHEEFLIHRLALLRA 160

Query: 126 ANKYDIVDLKNACEESLLEDINSGNVLERLQEAWLYQLNKLKRGCLTYLFDFGKIYDVRE 185
           A+KYDI DLK AC ESLLEDI++ NVL+RLQ A LYQL KLK  C+ YL  F +I+D+R+
Sbjct: 161 ADKYDIDDLKEACHESLLEDIDTKNVLDRLQSASLYQLPKLKMSCMMYLVKFSRIFDIRD 220

Query: 186 EMNNFFRQADRELMLEMFQEV 206
           + N+F + ADR+L+ E+F EV
Sbjct: 221 DFNDFMQCADRDLIAEIFNEV 241


>29648.m001966 protein binding protein, putative
          Length = 267

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 6/148 (4%)

Query: 59  LRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSMESCMSLLSYLYGTIKQEDFWKH 118
           + AHKA+L + SPVF++M  ++++E  S TI I D+S ++    ++YLY     E     
Sbjct: 108 VPAHKAVLVSRSPVFKAMLENEMEESHSGTIKISDVSYDALRMFINYLYTA---EACLDE 164

Query: 119 RLA--LLGAANKYDIVDLKNACEESLLEDINSGNVLERLQEAWLYQLNKLKRGCLTYLFD 176
           ++A  LL  A KY +  LK  CE+ L+  +N  N +     A L+    +    L+ + D
Sbjct: 165 QMACDLLVLAEKYQVKHLKAYCEKFLVSKLNWNNSVPSYAFAHLHNAKHMTEAALSLITD 224

Query: 177 FGKIYDVREEMNNFFRQADRELMLEMFQ 204
                  REE      + D  L++E+++
Sbjct: 225 NMDKLTKREEYKELVEK-DPRLVVEIYE 251


>29726.m003917 Speckle-type POZ protein, putative
          Length = 403

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 38  LSRMLDEAIHADVTIHTADGTLRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSME 97
             ++L+    ADV          AHK +L+  SPVF++     +K++ +  I +EDM   
Sbjct: 191 FGKLLESGKGADVNFEVDGEVFSAHKLVLATRSPVFRAQLFGPMKDQNTQCIKVEDMEAP 250

Query: 98  SCMSLLSYLY--------GTIKQEDFWKHRLA---LLGAANKYDIVDLKNACEESLLEDI 146
              +LL ++Y          +     W   L    LL AA++Y +  L+  CE  L EDI
Sbjct: 251 VFKALLHFIYWDALPDVEELVGLNSKWASTLIAQHLLAAADRYALERLRLVCEAKLCEDI 310

Query: 147 NSGNVLERLQEAWLYQLNKLKRGCLTYL 174
               V   L  A  +Q  +LK  CL ++
Sbjct: 311 AINTVATTLALAEQHQCLQLKAVCLKFI 338


>30143.m001182 Speckle-type POZ protein, putative
          Length = 408

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 38  LSRMLDEAIHADVTIHTADGTLRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSME 97
           L  +L+  +  D+     D T +AHK +L+A SPVF++ F   + +     + +ED+   
Sbjct: 182 LKELLESEVGCDIVFQVGDETFKAHKLILAARSPVFRAQFFGLVGDPNLDKVVVEDIDPS 241

Query: 98  SCMSLLSYLY-----------GTIKQEDFWKHRLALLGAANKYDIVDLKNACEESLLEDI 146
              ++L ++Y           GT            LL AA+ Y++  LK  CE  L E++
Sbjct: 242 IFKAMLLFIYTDKLPNVHEITGTTSMCTSTNMVQHLLAAADLYNLDQLKLLCESKLCEEL 301

Query: 147 NSGNVLERLQEAWLYQLNKLKRGCLTY 173
           ++  V   L  A  +Q ++LK  CL +
Sbjct: 302 SAETVATTLALAEQHQCSQLKVVCLKF 328


>29665.m000087 Speckle-type POZ protein, putative
          Length = 397

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 48  ADVTIHTADGTLRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSMESCMSLLSYLY 107
           +DVT + A     AHK +L+A SP+F+S F  D++E+E+  + I D+  +   ++L ++Y
Sbjct: 178 SDVTFNVAGEKFHAHKLVLAARSPLFRSKF-FDIEEEENQEVLITDLEPKVFKAMLHFMY 236

Query: 108 GTIKQEDFWKHRLA--------------LLGAANKYDIVDLKNACEESLLEDINSGNVLE 153
                ED      +              LL AA+KY +  L+  CE  L +DI+  +V  
Sbjct: 237 RDTLTEDVDTETSSSSCFSAVSETLTAKLLAAADKYGLDRLRLMCESHLCKDISVDSVAS 296

Query: 154 RLQEAWLYQLNKLKRGCLTY 173
            L  A      +LK  CL +
Sbjct: 297 ILALADCNHATELKAVCLRF 316


>30170.m014361 protein binding protein, putative
          Length = 806

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 17  SSIWPSDGMMQSVSTQSTLRCLSRMLDEAIHADVTIHTADGTL--RAHKAMLSASSPVFQ 74
            ++WP   M         ++ L ++  +  ++DV I+     L  R HK +LS  S  F 
Sbjct: 317 PNLWPHSYMTFPFGLPVNVQKLKKLHSDGEYSDVNIYVESYGLVARCHKVILSMWSVPFA 376

Query: 75  SMFHHDLKEKESSTIYIEDMSMESCMSLLSYLY-GTIKQE---DFWKHRLALLGAANKYD 130
            MF + + E  SS +Y+ D+S E+   +L ++Y G    E   DF    L LL  A+K+ 
Sbjct: 377 KMFTNGMSESSSSDVYLSDVSPEAFAIMLDFMYSGEFSLEDTMDFGSLLLQLLLLADKFG 436

Query: 131 IVDLKNACEESLLEDINSGNVLERL 155
           I  L   C ++LLE ++  +V   L
Sbjct: 437 ITLLYQECCKTLLESLSEDSVCPVL 461


>30072.m000949 BTB and MATH domain-containing protein, putative
          Length = 367

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 15/147 (10%)

Query: 41  MLDEAIHADVTIHTADGTLRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSMESCM 100
           +LD    +D+T +       AHK +L+A SPVF+S F  D  E++   + + D+  +   
Sbjct: 128 LLDNEECSDITFNVHGEKFHAHKLVLAARSPVFESEFF-DALEEDIHEVVVTDIEPKVFK 186

Query: 101 SLLSYLYGT--IKQEDFWKHRLA------------LLGAANKYDIVDLKNACEESLLEDI 146
           +LL ++Y    ++ E+      +            LL AA++YD+  L+  CE  L +DI
Sbjct: 187 ALLHFIYKDTLVEDEELSVSSSSSMSSTSDTLIAKLLAAADRYDLPRLRLMCESVLCKDI 246

Query: 147 NSGNVLERLQEAWLYQLNKLKRGCLTY 173
           +  +V + L  A  Y    LK  CL +
Sbjct: 247 SVNSVAKILALADRYNATDLKSVCLKF 273


>29844.m003359 protein binding protein, putative
          Length = 719

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 18/193 (9%)

Query: 15  EASSIWPSDGMMQSVSTQSTLRCLSRMLDEAIHADVTIHTADGTLRAHKAMLSASSPVFQ 74
           +A+++ P D    S + Q  L    + ++ A  +DVT         AH+  L ASS  F+
Sbjct: 521 KAATLSPVDAAPPSPTPQVYLG--EQFVNNATLSDVTFLVEGRRFYAHRICLLASSDAFR 578

Query: 75  SMFHHDLKEKESSTIYIEDMSMESCMSLLSYLY-GTIKQE-DFWKHRLALLGAANKYDIV 132
           +MF    +EK++  I I ++  E    ++ ++Y G++    D  +    LL AA++Y + 
Sbjct: 579 AMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVSLDIAQD---LLRAADQYLLE 635

Query: 133 DLKNACEESLLEDINSGNVLERLQEAWLYQLNKLKRGCLTYLFD-FGK----------IY 181
            LK  CE ++ +DI+  NV    + +  +    L+  C+ ++ + F K          I 
Sbjct: 636 GLKRLCEYTIAQDISLENVASMYELSEAFHAISLRHTCILFILEQFDKLNAKPRHSNLIQ 695

Query: 182 DVREEMNNFFRQA 194
            +  E+ N+F +A
Sbjct: 696 RIIPEIRNYFAKA 708


>29703.m001550 Speckle-type POZ protein, putative
          Length = 500

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 38  LSRMLDEAIHADVTIHTADGTLRAHKAMLSASSPVFQSMFHHDLKEKESSTIYIEDMSME 97
             ++L+     DV+         AHK +L+A SPVF++     +K++ +  I +EDM   
Sbjct: 200 FGQLLESGKGTDVSFEVDGEVFAAHKLVLAARSPVFRAQLFGPMKDQNTQLIKVEDMEAP 259

Query: 98  SCMSLLSYLY--GTIKQEDF------WKHRLA---LLGAANKYDIVDLKNACEESLLEDI 146
              +LL ++Y       E+       W   L    LL AA++Y +  L+  CE +L E++
Sbjct: 260 VFKALLHFIYWDSLPDLEELTGLNSKWASTLMSQHLLAAADRYGLDRLRLLCEANLCEEV 319

Query: 147 NSGNVLERLQEAWLYQLNKLKRGCLTYL 174
               V   L  +  +   +LK  CL ++
Sbjct: 320 AINTVATTLALSEQHHCFQLKAVCLKFV 347


>29729.m002324 protein binding protein, putative
          Length = 267

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 41  MLDEAIHADVTIHTADG--TLRAHKAMLSASSPVFQSMFHHD-LKEKESSTIYIEDMSME 97
           +  + I  D+ +   +G  ++ AH+A+L+A S +F++M   D  K     TI + +++ E
Sbjct: 85  LFRQQILTDIQLIPGNGGPSVSAHRALLAARSEIFRNMLDSDACKAPADDTITLAELNHE 144

Query: 98  SCMSLLSYLY-GTIKQEDFWKHRLALLGAANKYDIVDLKNACEESLLEDINSGNVLERLQ 156
              +LL +LY G++  E   KH  +L  AA+KY+I  L   CE  +L  ++S N L+ L+
Sbjct: 145 ELETLLEFLYSGSLATEKVEKHIYSLTLAADKYEIQFLLKFCERYMLRSLDSSNALDVLE 204

Query: 157 EAWLYQLNKLKRGCLTYL 174
            + +     LK   L ++
Sbjct: 205 ISDVCSNKILKETALNFI 222