Jatropha Genome Database

JcCB0868471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0868471.10 - phase: 0 /partial
         (104 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

51845.m000009 ATP synthase 9 mitochondrial, putative                   65   8e-12
58083.m000075 ATP synthase 9 mitochondrial, putative                   65   8e-12

>51845.m000009 ATP synthase 9 mitochondrial, putative
          Length = 60

 Score = 65.1 bits (157), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 32/32 (100%)

Query: 56 SVFSSLIHSVARNPSLAKQLFGYAILGFALTE 87
          +VFSSLIHSVARNPSLAKQLFGYAILGFALTE
Sbjct: 26 NVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57


>58083.m000075 ATP synthase 9 mitochondrial, putative
          Length = 101

 Score = 64.7 bits (156), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 32/32 (100%)

Query: 56 SVFSSLIHSVARNPSLAKQLFGYAILGFALTE 87
          +VFSSLIHSVARNPSLAKQLFGYAILGFALTE
Sbjct: 26 NVFSSLIHSVARNPSLAKQLFGYAILGFALTE 57