Jatropha Genome Database

JcCB0832121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0832121.10 - phase: 0 /pseudo
         (125 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000170 Beta-ureidopropionase, putative                         119   4e-28

>29506.m000170 Beta-ureidopropionase, putative
          Length = 415

 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 1/81 (1%)

Query: 1  METSEKIGGGNDIFEDNHISNDGSICGYDSLHHLLCANLKPHLFKEVSRLLLGMNCGKAI 60
          ME SEKI   N+  ED   S DGSICGY+SLHHLL ANLKPHLFKEVSRLL G+NCG+A+
Sbjct: 1  MEKSEKIETENNSIEDK-TSKDGSICGYESLHHLLRANLKPHLFKEVSRLLQGVNCGRAV 59

Query: 61 ETLVLPDSAKVISSKHDFDLQ 81
          E++ LP+SAK +SS+H+FDLQ
Sbjct: 60 ESIALPESAKSLSSEHEFDLQ 80