Jatropha Genome Database

JcCB0819391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0819391.10 - phase: 1 /partial
         (161 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014359 starch branching enzyme II, putative                    135   8e-33

>30170.m014359 starch branching enzyme II, putative
          Length = 914

 Score =  135 bits (340), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 77/143 (53%), Positives = 92/143 (64%), Gaps = 5/143 (3%)

Query: 15  EDKEGHEAEHFTSPEGIPGVAETNFNNRPNSFKVLSPARTCVAYYRVDESQEINNGGNLG 74
           + + GH+ +HFTSPEGIPGV ETNFNNRPNSFKVLSP +TCVAYYRV ESQE NN  N G
Sbjct: 774 QGRVGHDVDHFTSPEGIPGVPETNFNNRPNSFKVLSPPQTCVAYYRVQESQESNNSINPG 833

Query: 75  AVDETLTADAXXXXXXXXXXXXQNLATDTMEKKDNLEEVNTKKLAADTAVNQEDIKEPAD 134
           A +E  TAD             Q LA DT  K+ +LEEV  + LA+D A   E  KEPAD
Sbjct: 834 ARNEISTADDVPKLRDIEVGMKQTLAADTGAKRGDLEEVVNQTLASDAATMLEVFKEPAD 893

Query: 135 STMNGDAGPTMA---GNVEAEEI 154
                +  PT++   GN +A+EI
Sbjct: 894 DKDTEE--PTVSVKKGNSKAQEI 914