Jatropha Genome Database

JcCB0796091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0796091.10 + phase: 2 /partial
         (96 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013673 conserved hypothetical protein                          179   3e-46
29706.m001283 conserved hypothetical protein                          105   4e-24
28976.m000158 conserved hypothetical protein                           97   2e-21
29739.m003775 conserved hypothetical protein                           96   2e-21
29700.m000761 conserved hypothetical protein                           79   3e-16
30068.m002588 conserved hypothetical protein                           77   2e-15
30190.m011066 conserved hypothetical protein                           70   2e-13
27496.m000094 conserved hypothetical protein                           70   2e-13
29589.m001256 conserved hypothetical protein                           67   1e-12
30174.m008910 conserved hypothetical protein                           54   1e-08

>30170.m013673 conserved hypothetical protein
          Length = 617

 Score =  179 bits (453), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 84/96 (87%)

Query: 1   NMHGVFTEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXX 60
           NMHGV+TEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSA        
Sbjct: 143 NMHGVYTEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAGFSSFSGG 202

Query: 61  XXRPNTLPWGTFHLGFSNNTDPEPGRCRRTDGKKWR 96
             RPNTLPWG FHLGFS+N DPEPGRCRRTDGKKWR
Sbjct: 203 LLRPNTLPWGAFHLGFSSNNDPEPGRCRRTDGKKWR 238


>29706.m001283 conserved hypothetical protein
          Length = 340

 Score =  105 bits (262), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 4/95 (4%)

Query: 2  MHGVFTEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXX 61
          ++   T  R PFTPSQW ELEHQALIYKY+ + +PIP  L+  ++++L+S+         
Sbjct: 2  LNATSTRNRSPFTPSQWQELEHQALIYKYMVSGIPIPPELIFTVKRSLESSLASRLFPH- 60

Query: 62 XRPNTLPWGTFHLGFSNNTDPEPGRCRRTDGKKWR 96
               + WG F +GF    DPEPGRCRRTDGKKWR
Sbjct: 61 ---QPIGWGCFQVGFGRKADPEPGRCRRTDGKKWR 92


>28976.m000158 conserved hypothetical protein
          Length = 431

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 1   NMHGVFTEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIR-KALDSAXXXXXXX 59
           N++   +  RGPFTP Q MEL+HQ+LI+KYI+A   +P+NLLIP+R K++          
Sbjct: 110 NVNRASSGIRGPFTPYQLMELKHQSLIFKYISAGASVPTNLLIPLRNKSVYPYGLAPPTA 169

Query: 60  XXXRPNTLPWGTFHLGFSNNTDPEPGRCRRTDGKKWR 96
               P +L      L ++N  DPEPGRCRRTDGKKWR
Sbjct: 170 SLLSPYSLGGSNLGLNYANTNDPEPGRCRRTDGKKWR 206


>29739.m003775 conserved hypothetical protein
          Length = 253

 Score = 96.3 bits (238), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 12 PFTPSQWMELEHQALIYKYITANVPIPSNLLIPI-RKALDSAXXXXXXXXXXRPNTLPWG 70
          PFT SQW ELEHQALI+KY+ + +PIPS+LL  I R  LDS           +P  + W 
Sbjct: 9  PFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSP--LSSKLFPRQPPHIGWS 66

Query: 71 TFHLGFSNNTDPEPGRCRRTDGKKWR 96
           F +G     DPEPGRCRRTDGKKWR
Sbjct: 67 CFQMGLGRKIDPEPGRCRRTDGKKWR 92


>29700.m000761 conserved hypothetical protein
          Length = 479

 Score = 79.3 bits (194), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 5/85 (5%)

Query: 12  PFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXXXRPNTLPWGT 71
           PFT +QW ELE QA+IYKY+ A+VP+P +LL+P  + L S               L    
Sbjct: 80  PFTIAQWKELERQAMIYKYMMASVPVPPHLLLPTSRNLHSDPAAAASLSSLGSGGL---- 135

Query: 72  FHLGFSNNTDPEPGRCRRTDGKKWR 96
            +L ++N  D EPGRCRRTDGKKWR
Sbjct: 136 -NLKYTNGADLEPGRCRRTDGKKWR 159


>30068.m002588 conserved hypothetical protein
          Length = 507

 Score = 76.6 bits (187), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 10/87 (11%)

Query: 12  PFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXXXRPNTLPWGT 71
           PFT +Q  ELE Q +IYK++ A++P+P  LLIPI K   +A              +  G+
Sbjct: 129 PFTAAQLQELERQTIIYKHMMASIPVPPELLIPITKTQSNASPTQFH--------VVKGS 180

Query: 72  FHLGFSN--NTDPEPGRCRRTDGKKWR 96
             +G S+  N+DPEP RC+RTDGKKWR
Sbjct: 181 LEMGISSCTNSDPEPWRCKRTDGKKWR 207


>30190.m011066 conserved hypothetical protein
          Length = 233

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 1/71 (1%)

Query: 27  IYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXXX-RPNTLPWGTFHLGFSNNTDPEPG 85
           IYKYI A  P+P NL++PI K++ S+            P+ +     HL + N  DPEPG
Sbjct: 85  IYKYIEAGCPVPYNLVLPIWKSVSSSLGNLNSTLYQLYPSFMGASQLHLEYRNGMDPEPG 144

Query: 86  RCRRTDGKKWR 96
           RCRRTDGKKWR
Sbjct: 145 RCRRTDGKKWR 155


>27496.m000094 conserved hypothetical protein
          Length = 428

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 11  GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXXXRPNTLPWG 70
           G F+ +QW ELE QALIY+Y+ A   IP  LL PI+K+L  +            +     
Sbjct: 94  GYFSLAQWQELELQALIYRYMLAGAAIPPELLQPIKKSLLHSPPYFLHHPLQHYSYYQPA 153

Query: 71  TFHLGF--SNNTDPEPGRCRRTDGKKWR 96
               G+      DPEPGRCRRTDGKKWR
Sbjct: 154 LLQTGYWGRAAMDPEPGRCRRTDGKKWR 181


>29589.m001256 conserved hypothetical protein
          Length = 233

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 39/52 (75%)

Query: 1   NMHGVFTEARGPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSA 52
           N +GVF E RGPF+ +QW E+E QALIY+YI + V +P  LL PIRK L+SA
Sbjct: 133 NRNGVFGETRGPFSLAQWQEVELQALIYRYIISGVRVPPELLHPIRKGLNSA 184


>30174.m008910 conserved hypothetical protein
          Length = 436

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 23/88 (26%)

Query: 13  FTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAXXXXXXXXXXRPNTLPWGTF 72
            T +Q  EL+ Q  IY+YI A +P+PS L+ PI K+  +                   +F
Sbjct: 52  LTAAQLNELKLQVSIYEYIAAGLPVPSALVFPIWKSFAA-------------------SF 92

Query: 73  H-LGFSNNTDPEP---GRCRRTDGKKWR 96
           H  G   N    P   GRCRRTDGKKWR
Sbjct: 93  HSCGSIANAGIRPSYSGRCRRTDGKKWR 120