Jatropha Genome Database

JcCB0778081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0778081.10 - phase: 0 /partial
         (74 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002318 isocitrate dehydrogenase, putative                      121   7e-29
29628.m000748 isocitrate dehydrogenase, putative                       74   2e-14

>30078.m002318 isocitrate dehydrogenase, putative
          Length = 364

 Score =  121 bits (304), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/64 (87%), Positives = 62/64 (96%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           +N+ANPTAL+LS+VTMLRHLELHDKADRIQ+AIL TI+EGKYRTADLGG SSTTDFTKAI
Sbjct: 301 KNLANPTALMLSSVTMLRHLELHDKADRIQSAILDTISEGKYRTADLGGSSSTTDFTKAI 360

Query: 71  CDHL 74
           CDHL
Sbjct: 361 CDHL 364


>29628.m000748 isocitrate dehydrogenase, putative
          Length = 372

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 44/63 (69%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           +V Q  ANP ALLLS+  MLRHL+    ADR++ A+ + I+EGKYRT DLGG SST +  
Sbjct: 305 IVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVERVISEGKYRTKDLGGDSSTQEVV 364

Query: 68  KAI 70
            A+
Sbjct: 365 DAV 367