Jatropha Genome Database

JcCB0776371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0776371.10 + phase: 1 /partial
         (167 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005417 aspartyl-tRNA synthetase, putative                      318   8e-88
28708.m000178 aspartyl-tRNA synthetase, putative                      190   3e-49
29916.m000518 aspartyl-tRNA synthetase, putative                      142   8e-35
29910.m000926 aspartyl-tRNA synthetase, putative                       83   5e-17

>29912.m005417 aspartyl-tRNA synthetase, putative
          Length = 364

 Score =  318 bits (815), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 150/166 (90%), Positives = 159/166 (95%)

Query: 2   SVTAFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYP 61
           + T F+RISYTEAV LL +AV+GG +FEN VEWGIDLASEHERYLTE+LF+KPVIVYNYP
Sbjct: 199 ASTPFKRISYTEAVDLLIEAVKGGHKFENSVEWGIDLASEHERYLTEILFKKPVIVYNYP 258

Query: 62  KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWY 121
           KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRI EMGLP+EPYEWY
Sbjct: 259 KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIAEMGLPVEPYEWY 318

Query: 122 LDLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
           LDLRR+GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL
Sbjct: 319 LDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 364


>28708.m000178 aspartyl-tRNA synthetase, putative
          Length = 657

 Score =  190 bits (482), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 87/162 (53%), Positives = 118/162 (72%), Gaps = 2/162 (1%)

Query: 5   AFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYPKGI 64
           +++RI+Y EA+ +L++AV   K+ E + EWG  L ++   YL +  ++ PVI+YN+PK +
Sbjct: 497 SYQRITYKEALDVLKQAVD--KKVETQPEWGTALTAQQLSYLADEFYKSPVIIYNHPKEV 554

Query: 65  KAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYLDL 124
           K FY RLNDD KTVAA D++VPK G LI GSQ EER+ V+ +RI E+GLP E YEW LDL
Sbjct: 555 KPFYTRLNDDGKTVAAFDMVVPKGGTLITGSQNEERINVLNERINELGLPKEQYEWCLDL 614

Query: 125 RRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 166
           R  GTV+H GF  GF+ M+LFATGI ++RD IPFPR  G+ +
Sbjct: 615 RGHGTVEHSGFSFGFDLMVLFATGIPDVRDAIPFPRSSGKVN 656


>29916.m000518 aspartyl-tRNA synthetase, putative
          Length = 187

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 34/162 (20%)

Query: 6   FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYPKGIK 65
           F +++YT+A++LL KA    K+FE                              +P+ IK
Sbjct: 60  FVQLTYTDAIELLLKA---NKKFE------------------------------FPE-IK 85

Query: 66  AFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYLDLR 125
           AFYMR NDD KTVAAMD+LVP++GELIGGSQREERLE +++R+ ++ L  + Y WYLDLR
Sbjct: 86  AFYMRQNDDGKTVAAMDMLVPRIGELIGGSQREERLEYLEERLDDLKLNKDSYWWYLDLR 145

Query: 126 RFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
           R+G+V H GFGLGFER++ FATGIDNIRD IPFPR PG A+ 
Sbjct: 146 RYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRAPGSAEF 187


>29910.m000926 aspartyl-tRNA synthetase, putative
          Length = 540

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 13/162 (8%)

Query: 8   RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKP----VIVYNYPKG 63
           R+ + E +Q+L++A   G + +    +G DL +E ER L +++ +K      I++ YP  
Sbjct: 384 RLRFEEGIQMLKEA---GVEVD---PYG-DLNTEAERKLGQLVLEKYGTEFYILHRYPLA 436

Query: 64  IKAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYL 122
           ++ FY M   DD+K   + DV + +  E+I G+QR    E++++R    G+ +     Y+
Sbjct: 437 VRPFYTMPCYDDAKYSNSFDVFI-RGEEIISGAQRVHVPELLEERAKACGIDVSTISTYI 495

Query: 123 DLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGR 164
           D  R+G   H GFG+G ER+I+   G++NIR    FPR P R
Sbjct: 496 DSFRYGAPPHGGFGVGLERVIMLFCGLNNIRKTSLFPRDPMR 537