Jatropha Genome Database

JcCB0770041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0770041.10 + phase: 1 /partial
         (142 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001317 N-acetyl-gamma-glutamyl-phosphate reductase, putative   249   4e-67
27391.m000119 N-acetyl-gamma-glutamyl-phosphate reductase, putative    46   7e-06

>29780.m001317 N-acetyl-gamma-glutamyl-phosphate reductase, putative
          Length = 400

 Score =  249 bits (635), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 122/142 (85%), Positives = 126/142 (88%), Gaps = 8/142 (5%)

Query: 1   PEIEQGLSDVAHSKVTVSFTPHLMPMVTVLHLCMSRGMQSTIYVEMASGVTTEDLYQQLK 60
           PEIEQGLSD A SKV VSFTPHLMPM        SRGMQSTIYVEMAS VT EDLYQQLK
Sbjct: 267 PEIEQGLSDAASSKVIVSFTPHLMPM--------SRGMQSTIYVEMASEVTIEDLYQQLK 318

Query: 61  VSYENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRAIIISVIDNLIKGASGQAL 120
           VSYE EEF+KLLEKGVVPRTHDVRGSN+CY+NVFPDRIPGRAIIISVIDNL+KGASGQAL
Sbjct: 319 VSYEGEEFVKLLEKGVVPRTHDVRGSNYCYMNVFPDRIPGRAIIISVIDNLVKGASGQAL 378

Query: 121 QNLNIMMGFPENTGLHNLPLFP 142
           QNLNIMMGFPENTGL  LPLFP
Sbjct: 379 QNLNIMMGFPENTGLSCLPLFP 400


>27391.m000119 N-acetyl-gamma-glutamyl-phosphate reductase, putative
          Length = 212

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 31/43 (72%)

Query: 85  GSNFCYLNVFPDRIPGRAIIISVIDNLIKGASGQALQNLNIMM 127
           G+N   L+VFP+   G  ++ +V DNL KGASG A+QNLN+M+
Sbjct: 167 GTNDMQLSVFPNLEHGHVLLSAVFDNLGKGASGAAVQNLNLML 209