Jatropha Genome Database

JcCB0756571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0756571.10 + phase: 0 /partial
         (135 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28333.m000566 oligopeptidase A, putative                              209   3e-55

>28333.m000566 oligopeptidase A, putative
          Length = 780

 Score =  209 bits (532), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 103/132 (78%), Positives = 108/132 (81%)

Query: 4   VDETLGSNPLLQDFEFPPFDVVEAKHVRPGIRAXXXXXXXXXXXXXRTLEPSWPKLVEPF 63
            D +L SNPLLQDFEFPPFDVVEA HVRPGIRA              T+EPSWPKLVEP 
Sbjct: 80  TDISLQSNPLLQDFEFPPFDVVEADHVRPGIRALLKKLENDLEELESTVEPSWPKLVEPL 139

Query: 64  EKIIDQLAVVWGAINHLKSVKDTPELRAAIEEVQPEKVKFELRLGQSKPIYNAFKAIQES 123
           EKI+D L VVWG INHLKSVKDT ELRAAIEEVQPEKVKF+LRLGQSKPIYNAFKAIQES
Sbjct: 140 EKIVDHLTVVWGMINHLKSVKDTAELRAAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQES 199

Query: 124 PQWQSLSDAQKR 135
            QWQSLSDAQ+R
Sbjct: 200 SQWQSLSDAQRR 211