Jatropha Genome Database

JcCB0756221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0756221.10 + phase: 0 /partial
         (382 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000791 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s...   616   e-177

>30008.m000791 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase
           subunit B, putative
          Length = 549

 Score =  616 bits (1588), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 304/382 (79%), Positives = 316/382 (82%), Gaps = 54/382 (14%)

Query: 1   YEAIIGIETHVQLSTLTKAFCSCPYNYGAQPNSSICPICMGLPGALPVLNSKVIEFAVKL 60
           YE IIGIETHVQLSTLTKAFCSCPYNYGAQPNS+ICP+CMGLPGALPVLNSKVIEFAVKL
Sbjct: 68  YETIIGIETHVQLSTLTKAFCSCPYNYGAQPNSTICPVCMGLPGALPVLNSKVIEFAVKL 127

Query: 61  GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIGTGGYIDLDLPMEFGGGHRRFGI 120
           GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPI T GY+DLDLP+EFGGGHRRFGI
Sbjct: 128 GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIATSGYVDLDLPVEFGGGHRRFGI 187

Query: 121 TRLHMEEDAGKLLHSGNGSCISFVIYWLSFSIINWKFVSQLTSKIIIFRELLFLGIIRRF 180
           TR+HMEEDAGKLLHS  G  IS  I                                   
Sbjct: 188 TRVHMEEDAGKLLHS--GGGISGAI----------------------------------- 210

Query: 181 KMCVIIGFLTIFIVFFQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRMVRYLGVSN 240
                            VDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQR+VRYLGVSN
Sbjct: 211 -----------------VDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRVVRYLGVSN 253

Query: 241 GNMQEGSLRCDVNVSIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQVD 300
           GNMQEGSLRCDVNVSIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQ D
Sbjct: 254 GNMQEGSLRCDVNVSIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQSD 313

Query: 301 SIVQETRLWEEGAQKTVSMRKKEGLSDYRYFPEPDLPEVIFTKEYVDSIKNSLPDLPEIK 360
           SIVQETRLWEEGAQKTV+MRKKEGLSDYRYFPEPDLPEV+ T+EYVDSI++SLP+LPE K
Sbjct: 314 SIVQETRLWEEGAQKTVTMRKKEGLSDYRYFPEPDLPEVVLTEEYVDSIQSSLPELPETK 373

Query: 361 RRRYENMGLGMQDVLFLANDMS 382
           RRRYENMGL MQDVLFLAND S
Sbjct: 374 RRRYENMGLSMQDVLFLANDTS 395