Jatropha Genome Database

JcCB0747201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0747201.10 - phase: 2 /partial
         (109 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011214 Glutamate--cysteine ligase, chloroplast precursor,...   223   2e-59
48769.m000014 Glutamate--cysteine ligase, chloroplast precursor,...   148   6e-37

>30190.m011214 Glutamate--cysteine ligase, chloroplast precursor,
           putative
          Length = 526

 Score =  223 bits (567), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 103/111 (92%), Positives = 107/111 (96%), Gaps = 2/111 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDF+AGKLPCIPGELPTLNDWENHLTTIFP
Sbjct: 329 FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFLAGKLPCIPGELPTLNDWENHLTTIFP 388

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTPR 109
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDEISLQ+VLDM ADWTP 
Sbjct: 389 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEISLQNVLDMTADWTPE 439


>48769.m000014 Glutamate--cysteine ligase, chloroplast precursor,
           putative
          Length = 318

 Score =  148 bits (373), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 84/109 (77%), Gaps = 2/109 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           +E+Y +YALDVPMYFVYR  KYID  G +FRDF+ G+LP  PG  PT++DW +HL+T FP
Sbjct: 114 YERYAEYALDVPMYFVYRDGKYIDAAGQSFRDFLKGELPAYPGHKPTMDDWADHLSTAFP 173

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWT 107
           EVRLK +LEMRGADGG W R+CALPAFW+  +YD+ +L    ++V  W+
Sbjct: 174 EVRLKTFLEMRGADGGRWGRICALPAFWVGLLYDQGALDAAWELVKGWS 222