Jatropha Genome Database

JcCB0746061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0746061.10 + phase: 0 /partial
         (174 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative             306   4e-84
29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative             117   4e-27
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative              88   2e-18
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative              87   5e-18
29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative              86   7e-18
52614.m000013 9-cis-epoxycarotenoid dioxygenase, putative              66   7e-12
29794.m003376 9-cis-epoxycarotenoid dioxygenase, putative              57   3e-09

>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score =  306 bits (783), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 148/170 (87%), Positives = 158/170 (92%)

Query: 5   FLMVRPVFPPRLWNQQKYAVFADIQIGMNPVEMIFGGGSPVGLDPTKVPRIGIIPRYAKD 64
           F MVRP F       +KYA+FADIQI MNP++MIFGGGSPVG DPTKVPR+GIIPRYAKD
Sbjct: 354 FSMVRPSFLHDFAISKKYAIFADIQIVMNPMDMIFGGGSPVGADPTKVPRLGIIPRYAKD 413

Query: 65  ESEMRWFDVPGFNLIHAINAWDEEDAVVILAPNILSAEHTLERMELVHALVEKVRIDLKT 124
           ESEMRWFDVPGFNLIHAINAWDEEDA+V+LAPNILS EHTLERMELVHALVEKVRIDLKT
Sbjct: 414 ESEMRWFDVPGFNLIHAINAWDEEDAIVMLAPNILSVEHTLERMELVHALVEKVRIDLKT 473

Query: 125 GIVTRNPVSARNLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDVS 174
           GIVTRNPVSARNLDFAVINPAY+GKKN+YVYAAIGDPMPKI+GVVKLDVS
Sbjct: 474 GIVTRNPVSARNLDFAVINPAYIGKKNRYVYAAIGDPMPKISGVVKLDVS 523


>29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 536

 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 6/160 (3%)

Query: 20  QKYAVFADIQIGMNPVEMIFGGGSPVGLDPTKVPRIGIIPRYAKDESEMRWFDVPGFNLI 79
           + YA+F D+ +   P EM+         D TK  R G++PRYAKD+ EMRWF++P   + 
Sbjct: 271 ENYAIFLDLPMYFRPKEMVKEKKLIYTFDATKKARFGVLPRYAKDDREMRWFELPNCFIF 330

Query: 80  HAINAWDEEDAVVILA-----PNILSAEHTLE-RMELVHALVEKVRIDLKTGIVTRNPVS 133
           H  NAW+EED VV++      P++     T++ ++E     + ++R ++KTG+  +  +S
Sbjct: 331 HNANAWEEEDEVVLITCRLENPDLNMVSGTVKGKLENFKNELYEMRFNMKTGMALQKKLS 390

Query: 134 ARNLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDV 173
              +DF  +N +Y G+K ++VY  I D + K+TGV+K D+
Sbjct: 391 VSAVDFPRVNESYTGRKQRFVYGTILDSIAKVTGVIKFDL 430


>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 607

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 8/161 (4%)

Query: 20  QKYAVFADIQIGMNPVEMIFGGGSPVGLDPTKVPRIGIIPRYAKDESEMRWFDVPGFNLI 79
           + + V  D Q+     EMI  GGSPV  D  K  R GI+ + A+D +++ W + P     
Sbjct: 360 ENFVVIPDQQVVFKLQEMI-SGGSPVIYDKDKKSRFGILAKNARDANDIIWIESPDTFCF 418

Query: 80  HAINAWD--EEDAVVILAPNILSAEHTL-ERMELVHALVEKVRIDLKTGIVTRNPV---- 132
           H  NAW+  E D VV++   +   +    E  E + +++ ++R++L+TG  TR  +    
Sbjct: 419 HLWNAWEEPESDEVVVIGSCMTPPDSIFNECDESLKSVLSEIRLNLRTGKSTRREIIQES 478

Query: 133 SARNLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDV 173
           +  NL+  ++N   +G+K +YVY AI +P PK++G  K+D+
Sbjct: 479 NQVNLEAGMVNRNRIGRKTRYVYLAIVEPWPKVSGFAKVDL 519


>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 603

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 8/162 (4%)

Query: 20  QKYAVFADIQIGMNPVEMIFGGGSPVGLDPTKVPRIGIIPRYAKDESEMRWFDVPGFNLI 79
           + + V  D Q+     EMI  GGSPV  D  K+ R GI+ + + D S+++W + P     
Sbjct: 357 ENFVVVPDQQVVFKLPEMI-RGGSPVIYDKNKMSRFGILDKNSNDGSKIKWIEAPDCFCF 415

Query: 80  HAINAWD--EEDAVVILAPNILSAEHTL-ERMELVHALVEKVRIDLKTGIVTRNPVSAR- 135
           H  NAW+  E D VV++   +   +    E  E + +++ ++R++LKTG  TR  + ++ 
Sbjct: 416 HLWNAWEEPETDEVVVVGSCMTPPDSIFNECEESLKSVLSEIRLNLKTGKSTRRAIISQH 475

Query: 136 ---NLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDVS 174
              NL+  +++   +G+K ++ Y A+ +P PK++G  K+D++
Sbjct: 476 EQVNLEAGMVSRNLLGRKTRFAYLALAEPWPKVSGFAKVDLN 517


>29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 20  QKYAVFADIQIGMNPVEMIFGGGSPVGLDPTKVPRIGIIPRYAKDESEMRWFDVPGFNLI 79
           + + V  D Q+     EMI GG SPV  D  K  R GI+ +   +ES ++W +VP     
Sbjct: 351 RNFVVIPDHQVVFKLSEMIRGG-SPVIYDKNKTSRFGILSKNEVNESGIQWIEVPNCFCF 409

Query: 80  HAINAWDE----EDAVVILAPNILSAEHTL--ERMELVHALVEKVRIDLKTGIVTRNP-V 132
           H  N+W+E     D ++++  + ++   ++  E    + + + ++R++++T   TR   V
Sbjct: 410 HLWNSWEEISTNGDKIIVVIGSCMNPPDSIFNESETAIQSELSEIRLNMRTRESTRKAIV 469

Query: 133 SARNLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDV 173
              NL+   +N  +VG+K +YVY AI +P PK +G+ K+D+
Sbjct: 470 RGMNLEAGQVNRKFVGQKTRYVYLAIAEPWPKCSGIAKVDL 510


>52614.m000013 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 170

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 61/103 (59%), Gaps = 6/103 (5%)

Query: 77  NLIHAINAWDEEDAVVILA-----PNILSAEHTLE-RMELVHALVEKVRIDLKTGIVTRN 130
           + +   NAW+EED VV++      P++     T++ ++E     + ++R ++KTG+  + 
Sbjct: 8   DFLFLANAWEEEDEVVLITCRLENPDLNMVSGTVKGKLENFKNELYEMRFNMKTGMALQK 67

Query: 131 PVSARNLDFAVINPAYVGKKNKYVYAAIGDPMPKITGVVKLDV 173
            +S   +DF  +N +Y G+K ++VY  I D + K+TGV+K D+
Sbjct: 68  KLSVSAVDFPRVNESYTGRKQRFVYGTILDSIAKVTGVIKFDL 110


>29794.m003376 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 469

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 39/162 (24%)

Query: 48  DPTKVPRIGIIPRYAKDESEMRWFDVPGFNLIHAINAWDEEDAVVILAPNIL------SA 101
           D T+  RIGI+PRY   +S + WFDV      H +N +++ D VV      L      SA
Sbjct: 219 DKTEYARIGIMPRYGNADS-ICWFDVEPCCTFHILNCFEDGDEVVEWGCRSLESIISGSA 277

Query: 102 EHTLERMELVHA---LVEKV--------------------RIDLKTGIVTRNPVSAR--N 136
           +  LE+ E V       E V                    R++++TG V    V+    +
Sbjct: 278 DTNLEKFEWVSGRLTYTETVEEDKKTLTKDELFFCRCYEWRLNMRTGEVKGKNVTGTEFS 337

Query: 137 LDFAVINPAYVGKKNKYVYAAIGDP-------MPKITGVVKL 171
           L+F +IN  + G KN+Y Y  + D        +PK   + KL
Sbjct: 338 LEFPMINGEFTGTKNRYGYTQVVDSIASSISGLPKFGALAKL 379