Jatropha Genome Database

JcCB0740621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0740621.10 - phase: 0 
         (82 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28962.m000460 rac gtpase, putative                                    110   1e-25
30170.m014385 rac gtpase, putative                                    108   4e-25
29602.m000209 rac gtpase, putative                                    105   4e-24
29646.m001113 rac gtpase, putative                                     99   5e-22
29900.m001556 rac gtpase, putative                                     93   2e-20
30147.m013989 rac gtpase, putative                                     85   6e-18
29912.m005491 rac gtpase, putative                                     78   1e-15
29709.m001184 rac gtpase, putative                                     77   2e-15

>28962.m000460 rac gtpase, putative
          Length = 197

 Score =  110 bits (275), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 57/82 (69%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   DDKQFF+DHPGAVPIT  QGEELRKLI APAYIECSSKTQQNVK VFD AIR
Sbjct: 116 VGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDQAIR 175

Query: 61  VVLXXXXXXXXXXXXXXXCSIL 82
           VVL               CSIL
Sbjct: 176 VVLQPPKQKKKKSKAQKACSIL 197


>30170.m014385 rac gtpase, putative
          Length = 197

 Score =  108 bits (271), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 58/82 (70%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   +DKQFFIDHPGAVPIT  QGEELRKLI APAYIECSSK+QQNVK VFDAAI+
Sbjct: 116 VGTKLDLREDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKSQQNVKAVFDAAIK 175

Query: 61  VVLXXXXXXXXXXXXXXXCSIL 82
           VVL               CSIL
Sbjct: 176 VVLQPPKQRKKKKKGQKACSIL 197


>29602.m000209 rac gtpase, putative
          Length = 198

 Score =  105 bits (263), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/63 (77%), Positives = 52/63 (82%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   DDKQF IDHPGAVPIT  QGEELRKLI AP YIECSSKTQQNVK VFDAAI+
Sbjct: 116 VGTKLDLRDDKQFLIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 175

Query: 61  VVL 63
           VVL
Sbjct: 176 VVL 178


>29646.m001113 rac gtpase, putative
          Length = 197

 Score = 98.6 bits (244), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 51/63 (80%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   DDKQ+ IDHPGA PITA QGEEL+K++ A  YIECSSKTQQNVK VFDAAI+
Sbjct: 116 VGTKLDLRDDKQYLIDHPGATPITAAQGEELKKMVGAAVYIECSSKTQQNVKAVFDAAIK 175

Query: 61  VVL 63
           VVL
Sbjct: 176 VVL 178


>29900.m001556 rac gtpase, putative
          Length = 197

 Score = 93.2 bits (230), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 51/82 (62%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +    DKQ+ IDHPGA PIT  QGEELRK+I A  YIECSSKTQQNVK VFD+AI+
Sbjct: 116 VGTKLDLRQDKQYLIDHPGATPITTAQGEELRKIIGAITYIECSSKTQQNVKTVFDSAIK 175

Query: 61  VVLXXXXXXXXXXXXXXXCSIL 82
           V L               CS L
Sbjct: 176 VALRPPKPKKKPRKQKSSCSFL 197


>30147.m013989 rac gtpase, putative
          Length = 211

 Score = 85.1 bits (209), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 46/63 (73%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   +DK +  DHPG  P+T  QGEELRK I A  Y+ECSSKTQQNVK VFDA+I+
Sbjct: 118 VGTKLDLREDKHYLADHPGLTPVTTTQGEELRKQIGAAYYVECSSKTQQNVKAVFDASIK 177

Query: 61  VVL 63
           VV+
Sbjct: 178 VVI 180


>29912.m005491 rac gtpase, putative
          Length = 209

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 44/63 (69%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   DD+ +  DH     IT+ QGEELRK I A AYIECSSKTQQNVK VFD AI+
Sbjct: 116 VGTKLDLRDDRGYLADHMNFNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIK 175

Query: 61  VVL 63
           VVL
Sbjct: 176 VVL 178


>29709.m001184 rac gtpase, putative
          Length = 202

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 46/63 (73%)

Query: 1   MGCSMQTMDDKQFFIDHPGAVPITAVQGEELRKLINAPAYIECSSKTQQNVKGVFDAAIR 60
           +G  +   +D QF +D+PGA  I+  QG EL+K I A AY+ECSSKTQQNVK VFDAAI+
Sbjct: 122 VGTKLDLREDGQFHLDYPGACTISREQGIELKKQIGALAYVECSSKTQQNVKAVFDAAIK 181

Query: 61  VVL 63
            VL
Sbjct: 182 AVL 184