Jatropha Genome Database

JcCB0736301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0736301.10 - phase: 0 /partial
         (238 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002588 conserved hypothetical protein                          332   9e-92
29700.m000761 conserved hypothetical protein                          126   1e-29
30170.m013673 conserved hypothetical protein                          112   2e-25
29706.m001283 conserved hypothetical protein                          109   1e-24
28976.m000158 conserved hypothetical protein                          107   6e-24
27496.m000094 conserved hypothetical protein                          103   6e-23
29739.m003775 conserved hypothetical protein                          103   6e-23
30190.m011066 conserved hypothetical protein                           76   1e-14
30174.m008910 conserved hypothetical protein                           73   1e-13
30073.m002312 conserved hypothetical protein                           62   2e-10
29589.m001256 conserved hypothetical protein                           54   6e-08

>30068.m002588 conserved hypothetical protein
          Length = 507

 Score =  332 bits (851), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 176/257 (68%), Positives = 193/257 (75%), Gaps = 25/257 (9%)

Query: 2   GEMNPSSMNVAVPFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNPPSSQSHA 61
           GEM PSSMN+ VPFTAAQ QELERQT+IYK+MMAS+P+PPELLIPITKTQSN   +Q H 
Sbjct: 117 GEMTPSSMNMGVPFTAAQLQELERQTIIYKHMMASIPVPPELLIPITKTQSNASPTQFHV 176

Query: 62  LKGSLELGISGC-NSDPEPWRCKRTDGKKWRCSRDVAPDQKYCEXXXXXXXXXXXXXVEL 120
           +KGSLE+GIS C NSDPEPWRCKRTDGKKWRCSRDVAPDQKYCE             VEL
Sbjct: 177 VKGSLEMGISSCTNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKPVEL 236

Query: 121 HTDSMA----------QLLNQKSHFPNQTNSHNLSIFRSPTVSAAA----SYDQSRNLEW 166
           HTDSMA          QLLNQK HFP+QTNSH LS F S  VSA+A    S++Q R LEW
Sbjct: 237 HTDSMASNSNNYITNTQLLNQKPHFPSQTNSH-LSNFPSAMVSASATAANSFNQPRGLEW 295

Query: 167 FLKGETVPVASNSNQEWRYLK------DGERVYNYRQGQLDSNSYLNMNLR-GGHPLQAH 219
           FLKGET PV SNS+QEW YLK        E++Y+YR+GQ DSNSY  MNLR   H LQAH
Sbjct: 296 FLKGETAPVPSNSDQEWHYLKQDRIKGSDEKLYHYREGQYDSNSY--MNLRDNSHSLQAH 353

Query: 220 RLNENCSLLLSPKSTSL 236
           RLNENCSLLLSPKST L
Sbjct: 354 RLNENCSLLLSPKSTIL 370


>29700.m000761 conserved hypothetical protein
          Length = 479

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 110/211 (52%), Gaps = 41/211 (19%)

Query: 13  VPFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKT-QSNPPSSQSHALKGSLELGIS 71
            PFT AQW+ELERQ MIYKYMMASVP+PP LL+P ++   S+P ++ S +  GS  L + 
Sbjct: 79  FPFTIAQWKELERQAMIYKYMMASVPVPPHLLLPTSRNLHSDPAAAASLSSLGSGGLNLK 138

Query: 72  GCN-SDPEPWRCKRTDGKKWRCSRDVAPDQKYCEXXXXXXXXXXXXXVELHTDSMAQLLN 130
             N +D EP RC+RTDGKKWRCSRD APDQKYCE             VEL  ++      
Sbjct: 139 YTNGADLEPGRCRRTDGKKWRCSRDAAPDQKYCERHMHRGRPRSRKPVELLANTNNNKKI 198

Query: 131 QKSHFPNQTNSHN------------------LSIFRSPTVSA------------------ 154
           + ++  N TNS                    L     P V A                  
Sbjct: 199 RYNYVNNHTNSAQSPVAWAVANKNGAADSQFLGSIAQPYVQAPVFLDKPSTKVADFDGSM 258

Query: 155 --AASYDQSRNLEWFLKGETVPVASNSNQEW 183
             A+++ +SR+L+W +KGE   +A+ ++Q+W
Sbjct: 259 AFASNFKESRSLQWMMKGEAASIAT-ADQQW 288


>30170.m013673 conserved hypothetical protein
          Length = 617

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 65/99 (65%), Gaps = 9/99 (9%)

Query: 14  PFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKT-QSNPPSSQSHALK-------GS 65
           PFT +QW ELE Q +IYKY+ A+VPIP  LLIPI K   S   SS S  L        G+
Sbjct: 154 PFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRKALDSAGFSSFSGGLLRPNTLPWGA 213

Query: 66  LELGISGCNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
             LG S  N+DPEP RC+RTDGKKWRCSRD   DQKYCE
Sbjct: 214 FHLGFS-SNNDPEPGRCRRTDGKKWRCSRDAVADQKYCE 251


>29706.m001283 conserved hypothetical protein
          Length = 340

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 5/121 (4%)

Query: 4   MNPSSMNVAVPFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNPPSSQSHALK 63
           +N +S     PFT +QWQELE Q +IYKYM++ +PIPPEL+  + ++  +  +S+    +
Sbjct: 2   LNATSTRNRSPFTPSQWQELEHQALIYKYMVSGIPIPPELIFTVKRSLESSLASRLFPHQ 61

Query: 64  ----GSLELGISGCNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCEXXXXXXXXXXXXXVE 119
               G  ++G  G  +DPEP RC+RTDGKKWRCS++  PD KYCE             VE
Sbjct: 62  PIGWGCFQVGF-GRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 120

Query: 120 L 120
           L
Sbjct: 121 L 121


>28976.m000158 conserved hypothetical protein
          Length = 431

 Score =  107 bits (266), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 10/135 (7%)

Query: 2   GEMNPSSMNVAVPFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNP----PSS 57
           G +N +S  +  PFT  Q  EL+ Q++I+KY+ A   +P  LLIP+      P    P +
Sbjct: 109 GNVNRASSGIRGPFTPYQLMELKHQSLIFKYISAGASVPTNLLIPLRNKSVYPYGLAPPT 168

Query: 58  QS----HALKGSLELGISGCNS-DPEPWRCKRTDGKKWRCSRDVAPDQKYCEXXXXXXXX 112
            S    ++L GS  LG++  N+ DPEP RC+RTDGKKWRCS+DV PDQKYCE        
Sbjct: 169 ASLLSPYSLGGS-NLGLNYANTNDPEPGRCRRTDGKKWRCSKDVVPDQKYCERHINRGRH 227

Query: 113 XXXXXVELHTDSMAQ 127
                VE  TDS A+
Sbjct: 228 RSRKPVEGQTDSAAK 242


>27496.m000094 conserved hypothetical protein
          Length = 428

 Score =  103 bits (258), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 63/99 (63%), Gaps = 9/99 (9%)

Query: 15  FTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQ-SNPPSSQSHALK-------GSL 66
           F+ AQWQELE Q +IY+YM+A   IPPELL PI K+   +PP    H L+         L
Sbjct: 96  FSLAQWQELELQALIYRYMLAGAAIPPELLQPIKKSLLHSPPYFLHHPLQHYSYYQPALL 155

Query: 67  ELGISG-CNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
           + G  G    DPEP RC+RTDGKKWRCSRDV   QKYCE
Sbjct: 156 QTGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCE 194


>29739.m003775 conserved hypothetical protein
          Length = 253

 Score =  103 bits (257), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 8/99 (8%)

Query: 13  VPFTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNPPSSQS-------HALKGS 65
            PFTA+QWQELE Q +I+KYM++ +PIP +LL  I ++  + P S         H     
Sbjct: 8   FPFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPRQPPHIGWSC 67

Query: 66  LELGISGCNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
            ++G+ G   DPEP RC+RTDGKKWRCS++  PD KYCE
Sbjct: 68  FQMGL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCE 105


>30190.m011066 conserved hypothetical protein
          Length = 233

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 8/98 (8%)

Query: 15  FTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNPPSSQSHAL-------KGSLE 67
           FT  Q QEL+ Q++IYKY+ A  P+P  L++PI K+ S+   + +  L        G+ +
Sbjct: 71  FTILQLQELQLQSLIYKYIEAGCPVPYNLVLPIWKSVSSSLGNLNSTLYQLYPSFMGASQ 130

Query: 68  LGISGCNS-DPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
           L +   N  DPEP RC+RTDGKKWRCS++  PDQKYCE
Sbjct: 131 LHLEYRNGMDPEPGRCRRTDGKKWRCSKEALPDQKYCE 168


>30174.m008910 conserved hypothetical protein
          Length = 436

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 15  FTAAQWQELERQTMIYKYMMASVPIPPELLIPITKTQSNPPSSQSHALKGSLELGISGCN 74
            TAAQ  EL+ Q  IY+Y+ A +P+P  L+ PI K+ +    S        +    SG  
Sbjct: 52  LTAAQLNELKLQVSIYEYIAAGLPVPSALVFPIWKSFAASFHSCGSIANAGIRPSYSG-- 109

Query: 75  SDPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
                 RC+RTDGKKWRC + V   QKYCE
Sbjct: 110 ------RCRRTDGKKWRCKKIVVTGQKYCE 133



 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 2/34 (5%)

Query: 73  CNSDPE--PWRCKRTDGKKWRCSRDVAPDQKYCE 104
           C SD E    RC+RTDGKKWRC RDV P++KYC+
Sbjct: 306 CRSDAELETGRCRRTDGKKWRCRRDVVPNEKYCK 339


>30073.m002312 conserved hypothetical protein
          Length = 259

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 26/33 (78%)

Query: 72  GCNSDPEPWRCKRTDGKKWRCSRDVAPDQKYCE 104
           G   DPEP RC+RTDGKKWRCS+D  PD KYCE
Sbjct: 11  GKKVDPEPGRCRRTDGKKWRCSKDAYPDSKYCE 43


>29589.m001256 conserved hypothetical protein
          Length = 233

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 29/36 (80%)

Query: 14  PFTAAQWQELERQTMIYKYMMASVPIPPELLIPITK 49
           PF+ AQWQE+E Q +IY+Y+++ V +PPELL PI K
Sbjct: 144 PFSLAQWQEVELQALIYRYIISGVRVPPELLHPIRK 179