Jatropha Genome Database

JcCB0735811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0735811.10 + phase: 0 
         (127 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29844.m003291 imidazoleglycerol-phosphate dehydratase his7, puta...   112   3e-26

>29844.m003291 imidazoleglycerol-phosphate dehydratase his7,
           putative
          Length = 278

 Score =  112 bits (281), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 3/103 (2%)

Query: 23  KVRISPRNLLPTRIHYPIFSSTPIQMD-SQSTLRASSSQDNGSTVTSSPI--ESVGREGR 79
           +VRI   + +P RI +PI SSTPIQM+ S S+L A   QDNGSTVT++P   ES G E R
Sbjct: 23  RVRIHHTSPVPVRISHPILSSTPIQMNHSLSSLHAVPLQDNGSTVTTTPSPTESSGNEVR 82

Query: 80  IGEVKRVTRETNVSVNINLDGTGIADSSTGIPFLDHMLDVVLS 122
           IGEVKRVT+ETNVSV INLDGTG++DS+TGIPFLDHMLD + S
Sbjct: 83  IGEVKRVTKETNVSVKINLDGTGVSDSTTGIPFLDHMLDQLAS 125