Jatropha Genome Database

JcCB0733091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0733091.10 - phase: 2 /partial
         (74 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30064.m000482 gaba(A) receptor-associated protein, putative           145   3e-36
30064.m000481 gaba(A) receptor-associated protein, putative           141   6e-35
29842.m003584 gaba(A) receptor-associated protein, putative           136   2e-33
29636.m000773 gaba(A) receptor-associated protein, putative           131   6e-32
30174.m008829 gaba(A) receptor-associated protein, putative           126   2e-30
29889.m003380 autophagy 8h, putative                                   91   9e-20
30076.m004580 autophagy 8h, putative                                   91   1e-19

>30064.m000482 gaba(A) receptor-associated protein, putative
          Length = 125

 Score =  145 bits (367), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/74 (91%), Positives = 73/74 (98%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFV+N+LPPTAAMMSAIYEENKDEDGFLYMT
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMT 109

Query: 61  YSGENTFGLSMKVQ 74
           YSGENTFG S+++Q
Sbjct: 110 YSGENTFGASVELQ 123


>30064.m000481 gaba(A) receptor-associated protein, putative
          Length = 120

 Score =  141 bits (356), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 67/70 (95%), Positives = 69/70 (98%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFV+N+LPPTAAMMSAIYEENKDEDGFLYMT
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMT 109

Query: 61  YSGENTFGLS 70
           YSGENTFG S
Sbjct: 110 YSGENTFGES 119


>29842.m003584 gaba(A) receptor-associated protein, putative
          Length = 120

 Score =  136 bits (343), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/70 (90%), Positives = 67/70 (95%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKL AEKAIF+FV+N LPPTAA++SAIYEENKDEDGFLYMT
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALLSAIYEENKDEDGFLYMT 109

Query: 61  YSGENTFGLS 70
           YSGENTFGL 
Sbjct: 110 YSGENTFGLQ 119


>29636.m000773 gaba(A) receptor-associated protein, putative
          Length = 122

 Score =  131 bits (330), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 65/68 (95%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV NVLPPT A+MSAIYEE KDEDGFLY+T
Sbjct: 50  YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVT 109

Query: 61  YSGENTFG 68
           YSGENTFG
Sbjct: 110 YSGENTFG 117


>30174.m008829 gaba(A) receptor-associated protein, putative
          Length = 117

 Score =  126 bits (316), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 63/68 (92%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQ VYV+RKRIKLSAEKAIFIFV NVLPPT A+MS IY+E KDEDGFLY+T
Sbjct: 50  YLVPADLTVGQLVYVIRKRIKLSAEKAIFIFVDNVLPPTGAVMSTIYDEKKDEDGFLYVT 109

Query: 61  YSGENTFG 68
           YSGENTFG
Sbjct: 110 YSGENTFG 117


>29889.m003380 autophagy 8h, putative
          Length = 115

 Score = 91.3 bits (225), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 53/68 (77%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVP   +VGQF++++  R+ L+  KA+F+FV+N LPPTA++M ++YE  KD+DGFLYM 
Sbjct: 48  YLVPRATSVGQFIHILSGRLHLAPGKALFVFVKNTLPPTASLMDSVYESYKDDDGFLYMY 107

Query: 61  YSGENTFG 68
           YS E TFG
Sbjct: 108 YSSEKTFG 115


>30076.m004580 autophagy 8h, putative
          Length = 125

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 53/68 (77%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVP D++VGQF++V+  R++++  KA+F+FV N LP TA +M+++YE  KD DGFLYM 
Sbjct: 51  YLVPRDMSVGQFIHVLSSRLRMAPGKALFVFVENTLPQTATLMNSVYESFKDGDGFLYMC 110

Query: 61  YSGENTFG 68
           YS E TFG
Sbjct: 111 YSSEKTFG 118