Jatropha Genome Database

JcCB0704941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0704941.10 + phase: 0 /partial
         (106 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27446.m000472 Cycloartenol synthase, putative                         140   1e-34
30169.m006605 Cycloartenol synthase, putative                         135   4e-33
29693.m001997 cycloartenol synthase, putative                         119   2e-28
29702.m000164 Cycloartenol synthase, putative                         115   3e-27
29667.m000347 Cycloartenol synthase, putative                         113   2e-26
30169.m006606 Cycloartenol synthase, putative                         107   9e-25
29588.m000887 Cycloartenol synthase, putative                          89   4e-19
29588.m000889 Cycloartenol synthase, putative                          76   3e-15

>27446.m000472 Cycloartenol synthase, putative
          Length = 757

 Score =  140 bits (353), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 65/85 (76%), Positives = 74/85 (87%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           NLV TA A+MGLIHGGQ + DP PL+ AAKLLINSQTELGDFPQQE +GV+M+NCM+HYA
Sbjct: 673 NLVHTAMAMMGLIHGGQAKRDPTPLYRAAKLLINSQTELGDFPQQEQIGVFMRNCMLHYA 732

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
           AYRNIFPLWALAEY QH S  SK++
Sbjct: 733 AYRNIFPLWALAEYCQHVSLPSKNI 757


>30169.m006605 Cycloartenol synthase, putative
          Length = 744

 Score =  135 bits (340), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)

Query: 1   GERVIFHVQTRNMFLLRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTEL 60
           GE  I   Q + + L   R  NLV TAW +MGLI+GGQ + DP PLH AAKL+INSQ E 
Sbjct: 640 GESYISCPQKKYVALEGKR-WNLVHTAWGMMGLINGGQMDRDPKPLHAAAKLIINSQLED 698

Query: 61  GDFPQQEILGVYMKNCMVHYAAYRNIFPLWALAEYRQHFSFSSKSV 106
           GDFPQQEI GV+MKNCM+HYAAYRNI+PLWALAEYR     +S+++
Sbjct: 699 GDFPQQEITGVFMKNCMLHYAAYRNIYPLWALAEYRNRVPLTSRTI 744


>29693.m001997 cycloartenol synthase, putative
          Length = 397

 Score =  119 bits (299), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 2/93 (2%)

Query: 8   VQTRNMFLLRVRG--QNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQ 65
           +  RN+    + G   +LVQTAWA+MGLIH GQ E DPAPLH AA+  INSQ E G+FPQ
Sbjct: 298 LSCRNLEYTPLEGNRSHLVQTAWAMMGLIHAGQVERDPAPLHNAARFFINSQLETGEFPQ 357

Query: 66  QEILGVYMKNCMVHYAAYRNIFPLWALAEYRQH 98
           QEI G  ++ CM+HYA+YRNIFPLWAL  YR++
Sbjct: 358 QEISGASLRTCMLHYASYRNIFPLWALGLYRKY 390


>29702.m000164 Cycloartenol synthase, putative
          Length = 352

 Score =  115 bits (289), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 61/81 (75%)

Query: 24  VQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAAY 83
           V T WA++ LI  GQ E DP PLH AAK+LINS  E GDFPQQEI+GV+ KNCM++Y+ Y
Sbjct: 270 VSTGWAMLALIEAGQAERDPYPLHRAAKVLINSMLETGDFPQQEIMGVFNKNCMINYSNY 329

Query: 84  RNIFPLWALAEYRQHFSFSSK 104
           RNIFP+WAL EY +H    SK
Sbjct: 330 RNIFPIWALGEYLKHVILPSK 350


>29667.m000347 Cycloartenol synthase, putative
          Length = 753

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%)

Query: 23  LVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAA 82
           +V TAWA++ LI  GQ E DP PLH AA+ LIN+Q E GDFPQQEI+GV+ +NCM+ YAA
Sbjct: 673 VVNTAWAMLSLIDAGQAERDPTPLHRAARYLINAQMENGDFPQQEIMGVFNRNCMITYAA 732

Query: 83  YRNIFPLWALAEYR 96
           YR+IFP+WAL EYR
Sbjct: 733 YRDIFPIWALGEYR 746


>30169.m006606 Cycloartenol synthase, putative
          Length = 757

 Score =  107 bits (268), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 58/77 (75%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           NLV TAWA++GLI  GQ + DP P+H  A++LINSQ E G FPQQEI G +  N M+HY 
Sbjct: 679 NLVHTAWAMLGLIQSGQTKRDPTPIHRGARVLINSQQEDGSFPQQEITGAFKNNNMLHYP 738

Query: 82  AYRNIFPLWALAEYRQH 98
            Y++ FPLWALAEYR+H
Sbjct: 739 IYKDCFPLWALAEYRKH 755


>29588.m000887 Cycloartenol synthase, putative
          Length = 679

 Score = 89.0 bits (219), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 43/47 (91%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEI 68
           NLV TAWALMGLIH GQ +IDPAPLHLAAKLLINSQTELGDFPQQ I
Sbjct: 613 NLVHTAWALMGLIHAGQAQIDPAPLHLAAKLLINSQTELGDFPQQVI 659


>29588.m000889 Cycloartenol synthase, putative
          Length = 741

 Score = 76.3 bits (186), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 28/82 (34%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           NLVQTAWA+MGLI+GGQ                            E+ G +M+NCM+HYA
Sbjct: 677 NLVQTAWAMMGLIYGGQ----------------------------ELTGAFMRNCMLHYA 708

Query: 82  AYRNIFPLWALAEYRQHFSFSS 103
            +RN FP+WALAEYR+H  F S
Sbjct: 709 LFRNTFPIWALAEYRRHVLFPS 730