Jatropha Genome Database

JcCB0703071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0703071.10 - phase: 0 
         (55 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29838.m001690 mads box protein, putative                              100   2e-22
29596.m000699 mads box protein, putative                               82   4e-17
30147.m014133 mads box protein, putative                               80   3e-16
29782.m000119 Floral homeotic protein DEFICIENS, putative              78   7e-16
29804.m001536 mads box protein, putative                               78   8e-16
29908.m005982 mads box protein, putative                               78   9e-16
30174.m008934 mads box protein, putative                               77   1e-15
30221.m002218 mads box protein, putative                               77   2e-15
30138.m003939 mads box protein, putative                               76   3e-15
30170.m013776 mads box protein, putative                               75   7e-15
28348.m000077 mads box protein, putative                               74   1e-14
29907.m000663 mads box protein, putative                               74   2e-14
29648.m001978 mads box protein, putative                               73   3e-14
30138.m004061 mads box protein, putative                               71   9e-14
29693.m002039 mads box protein, putative                               71   1e-13
29813.m001508 mads box protein, putative                               70   3e-13
29613.m000367 mads box protein, putative                               67   2e-12
29693.m002042 mads box protein, putative                               65   5e-12
30099.m001672 mads box protein, putative                               65   8e-12
27866.m000233 mads box protein, putative                               65   8e-12
30099.m001671 mads box protein, putative                               65   9e-12
29739.m003627 mads box protein, putative                               63   4e-11
28830.m000229 mads box protein, putative                               62   4e-11
29693.m002041 mads box protein, putative                               61   1e-10
29838.m001672 mads box protein, putative                               59   5e-10
29653.m000299 mads box protein, putative                               53   2e-08
27893.m000228 mads box protein, putative                               52   7e-08
29912.m005524 mads box protein, putative                               51   9e-08
28180.m000391 mads box protein, putative                               51   1e-07
30190.m010925 conserved hypothetical protein                           48   1e-06

>29838.m001690 mads box protein, putative
          Length = 61

 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 52/55 (94%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R+KI+IKKIDNITARQVTFSKRRRGLFKKA ELS LCDAE+AL+VFSATGKLF
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLF 55


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 82.4 bits (202), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 48/55 (87%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R KI I++IDN T+RQVTFSKRR GL KKA+EL++LCDAEV +++FS+TGKL+
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLY 55


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 46/54 (85%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKL 54
          M R KI++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEVA+I+FS  G+L
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRL 54


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 78.2 bits (191), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 48/55 (87%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R KI+IKKI+N T RQVT+SKRR G+FKKA+EL+VLCDA+V+LI+FS +G+ F
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKF 55


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 78.2 bits (191), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 46/55 (83%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R KI I++IDN T+RQVTFSKRR GL KKA ELS+LCDAEV +I+FS+T KL+
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLY 82


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 77.8 bits (190), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/54 (64%), Positives = 45/54 (83%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKL 54
          M R K++IK+I+N T RQVTFSKRR GL KKA ELS+LCD ++ALI+FS +G+L
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRL 54


>30174.m008934 mads box protein, putative
          Length = 244

 Score = 77.4 bits (189), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 46/55 (83%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R ++++K+I+N   RQVTFSKRR GL KKA ELSVLCDAEVALI+FS+ GKL+
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 55


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/54 (68%), Positives = 44/54 (81%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKL 54
          M R KI IK+I+N T RQVTFSKRR GL KK  ELSVLCDA++ LI+FS+TGK+
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKM 54


>30138.m003939 mads box protein, putative
          Length = 244

 Score = 76.3 bits (186), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 45/55 (81%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R ++++K+I+N   RQVTFSKRR GL KKA E+SVLCDAEVALIVFS  GKLF
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLF 55


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 75.1 bits (183), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/54 (68%), Positives = 45/54 (83%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKL 54
          M R K++IK+I+N T RQVTFSKRR GL KKA ELSVLCD +VALI+FS +G+L
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRL 54


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 73.9 bits (180), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 44/54 (81%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R+KI+IKK++N+  R VTFSKR+ G+FKKA ELS LC AE+A+++FS  GK+F
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 45/55 (81%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          MAR K+++K+I+N   RQVTF KRR GL KKA+ELSVLCDAE+ L +FSA GKL+
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLY 55


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 72.8 bits (177), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 48/54 (88%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKL 54
          M R +I+IK+I+N + RQVT+SKRR G+ KKA+E++VLCDAEV+LI+F+++GK+
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKM 54


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 71.2 bits (173), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 43/53 (81%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          M R K+KIK++++ + RQVT+SKRR G+ KKA+ELS+LCD  + L++FS TGK
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 43/55 (78%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R KI++K + + ++RQVTFSKRR GLFKKA EL+ LC A++A++VFS  GK F
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPF 55


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 41/53 (77%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          M R K+KIKK++N   RQ T+ KR+ G+ KKA+ELS+LCD ++ L++FS TGK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 66.6 bits (161), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 39/55 (70%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          + R+KI I+KI   +  QVTFSKRR GLFKKA EL  LC  E+A+IVFS  GK F
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAF 60


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/54 (55%), Positives = 39/54 (72%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R+KI +K+I+N   R +TFSKRR G++KKA EL  LC AEV ++VFS  GK F
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPF 62


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 65.1 bits (157), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/54 (61%), Positives = 40/54 (74%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R+KI + K+ N +  QVTFSKRR GLFKKA ELS LC AE+A+IVFS   K+F
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVF 60


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 64.7 bits (156), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 41/54 (75%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R+KI+IK I+  +  QVTFSKRR GLFKKA ELS+LC A+VA++ FS   K+F
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVF 66


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/55 (58%), Positives = 38/55 (69%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          + R+KI I+KI   T  QVTFSKRR GLFKKA EL  LC  E+A++VFS   K F
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAF 80


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 41/53 (77%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          M R K+KI +++++ ARQV +SKR+ G+ KK +EL+ LCD ++ LI+FS +GK
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 38/55 (69%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
          M R+K ++  I   +ARQV+FSKRR G+FKKA EL  LC  E A+++FS  GK F
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAF 55


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R+KI++KKI+N   R +TFSKRR G++KKA EL  L  AE+A +V+S  GK F
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPF 65


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 2  AREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGKLF 55
           R++I++ KI   + R VTFSKRR G+FKKA ELS LC AE+++IVFS   + F
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAF 61


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 53.1 bits (126), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 3/54 (5%)

Query: 5  KIKIKKI-DNITARQVTFSKRRRGLFKKAEELSVL--CDAEVALIVFSATGKLF 55
          KI+IKKI DN T   VTFSKRR GLFKKA E   L    AEVALI FS +G+ F
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPF 82


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 51.6 bits (122), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 35/49 (71%)

Query: 5  KIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          K  +KK+++   R V+F+KRR GLF KA EL +LCDA++A++V S   K
Sbjct: 6  KRPMKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSK 54


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 51.2 bits (121), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 33/49 (67%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFS 49
          M R K+ ++ I N  +R +T+ KR++GL KK +E  +LCD +  +I+FS
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFS 49


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 1  MAR-EKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          MA+  K+ +KK +    R V+F+KRR GLF KA EL +LCDA++AL+V S   +
Sbjct: 1  MAKTRKLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSR 54


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 1  MAREKIKIKKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIVFSATGK 53
          M   +IK++ I+  + R +T+ KR++ L KK  E S+LC  E  LI+F+   K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53