Jatropha Genome Database

JcCB0699651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0699651.10 - phase: 0 /partial
         (155 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002561 conserved hypothetical protein                          307   1e-84
30098.m001746 conserved hypothetical protein                          294   1e-80
29172.m000216 conserved hypothetical protein                           66   6e-12

>30068.m002561 conserved hypothetical protein
          Length = 460

 Score =  307 bits (787), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 145/155 (93%), Positives = 154/155 (99%)

Query: 1   MEIFYFMVFGGLSAVVAALELSKTSRDRINTSTAFNAFKNNYLVVYSLMMAGDWLQGPYV 60
           ME+FYFMVFGGL+AVVAA+ELSKTSRDR+NT++AFNAFKNNYL+VYSLMMAGDWLQGPYV
Sbjct: 1   MEMFYFMVFGGLAAVVAAIELSKTSRDRVNTTSAFNAFKNNYLLVYSLMMAGDWLQGPYV 60

Query: 61  YYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCMTKH 120
           YYLYS YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSC+TKH
Sbjct: 61  YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCITKH 120

Query: 121 SPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
           SP+YKVLMLGRVLGGIATSLLFSAFESWLVAEHFK
Sbjct: 121 SPEYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155


>30098.m001746 conserved hypothetical protein
          Length = 460

 Score =  294 bits (752), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 138/155 (89%), Positives = 150/155 (96%)

Query: 1   MEIFYFMVFGGLSAVVAALELSKTSRDRINTSTAFNAFKNNYLVVYSLMMAGDWLQGPYV 60
           ME+F++MVFGGL AVVAALELSKT++DRINTS AFN+FKNNYL+VYSLMMAGDWLQGPYV
Sbjct: 1   MEVFFYMVFGGLGAVVAALELSKTNKDRINTSPAFNSFKNNYLLVYSLMMAGDWLQGPYV 60

Query: 61  YYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCMTKH 120
           Y+LYS YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR+RAC+TYCITYILSC+TKH
Sbjct: 61  YFLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACITYCITYILSCITKH 120

Query: 121 SPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
           SP YKVLM+GRVLGGIATSLLFSAFESWLVAEH K
Sbjct: 121 SPQYKVLMIGRVLGGIATSLLFSAFESWLVAEHNK 155


>29172.m000216 conserved hypothetical protein
          Length = 424

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 32  STAFNAFKNNYLVVYSL--MMAGDW-LQGPYVYYLYSEYGFGKGEIGQLFIAGFGSSMLF 88
           S +F  F++ +L ++SL  +M G W + G +   LY   G  K +       GFG+++  
Sbjct: 51  SPSFLRFQSKFLFLFSLASVMEGLWSVFGEFELVLY---GVSKVQTVTYLCVGFGAALFL 107

Query: 89  GTIVGSLADKQGRRRACVTYCITYILSCMTKHSPDYKVLMLGRVLGGIATSLLFSAFESW 148
           GT++G L+D  G ++AC+ +CI ++   + K    +  + LG +   +ATS+   +FE+W
Sbjct: 108 GTLLGMLSDFIGHKKACLMFCILHLFVGIWKRIMSHPSIWLGSICLSLATSIFSFSFEAW 167

Query: 149 LVAEHFK 155
           LVAE+ K
Sbjct: 168 LVAENKK 174