Jatropha Genome Database

JcCB0697191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0697191.10 - phase: 1 /partial
         (132 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29773.m000286 formate-tetrahydrofolate ligase, putative               240   1e-64
29773.m000288 methylenetetrahydrofolate dehydrogenase, putative       225   5e-60
29121.m000032 methylenetetrahydrofolate dehydrogenase, putative        96   5e-21

>29773.m000286 formate-tetrahydrofolate ligase, putative
          Length = 415

 Score =  240 bits (613), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/132 (85%), Positives = 118/132 (89%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           +ACENVTQPLKFLYPL            RSYGA  VEYSEQA+KQIEMYSRQGFSGLPIC
Sbjct: 284 RACENVTQPLKFLYPLDISIEEKIEAIARSYGASAVEYSEQAKKQIEMYSRQGFSGLPIC 343

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFSHNA+EKGAPSGF+LPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID
Sbjct: 344 MAKTQYSFSHNAAEKGAPSGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 403

Query: 121 LDTATGKVIGLS 132
           +DTATGKVIGLS
Sbjct: 404 VDTATGKVIGLS 415


>29773.m000288 methylenetetrahydrofolate dehydrogenase, putative
          Length = 347

 Score =  225 bits (573), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 113/132 (85%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           +ACENVTQPLKFLYPL            RSY A  VEYSEQA+KQIEMYSRQGFSGLPIC
Sbjct: 216 RACENVTQPLKFLYPLDISIEEKIEAIARSYDATAVEYSEQAKKQIEMYSRQGFSGLPIC 275

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFSHNA+EKGAPS F+LPIRDVRASIGAG IY LVGTMSTMPGLPTRP FYDID
Sbjct: 276 MAKTQYSFSHNAAEKGAPSAFILPIRDVRASIGAGSIYRLVGTMSTMPGLPTRPYFYDID 335

Query: 121 LDTATGKVIGLS 132
           +DTATGKVIGLS
Sbjct: 336 VDTATGKVIGLS 347


>29121.m000032 methylenetetrahydrofolate dehydrogenase, putative
          Length = 342

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)

Query: 29  RSYGAQGVEYSEQAEKQIEMYSRQGFSGLPICMAKTQYSFSHNASEKGAPSGFVLPIRDV 88
           + YG +G+  +  A++++    R GF   PICMAKTQYSFS +A + GAP+ F + I ++
Sbjct: 240 KVYGGKGIRLTPAAKRELADLERLGFGNYPICMAKTQYSFSDDAKKLGAPTDFTVTISNL 299

Query: 89  RASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDLDTATGKVIGL 131
           + S GAGFI  L G + TMPGLP  P    ID+D   G + GL
Sbjct: 300 KVSAGAGFIVALTGAIMTMPGLPKVPASETIDIDE-EGNITGL 341