Jatropha Genome Database

JcCB0696091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0696091.10 + phase: 0 /pseudo
         (153 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29640.m000405 EH-domain-containing protein, putative                  119   7e-28
29842.m003519 EH-domain-containing protein, putative                   87   3e-18

>29640.m000405 EH-domain-containing protein, putative
          Length = 550

 Score =  119 bits (297), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 2/63 (3%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV--IL 58
          MEIS+GP+GSCSK+NQKIYLEWF FADSDGDGRITGNDAIKFFGMSNLSRQDLKQV  I 
Sbjct: 1  MEISAGPVGSCSKENQKIYLEWFAFADSDGDGRITGNDAIKFFGMSNLSRQDLKQVWAIA 60

Query: 59 NDK 61
          N K
Sbjct: 61 NSK 63


>29842.m003519 EH-domain-containing protein, putative
          Length = 545

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/56 (67%), Positives = 44/56 (78%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          MEI  G +GSCSK++Q +Y +WFN ADSDGDGRI+G DA  FF  SNLSR DLKQV
Sbjct: 1  MEIGKGWMGSCSKEDQHLYKDWFNSADSDGDGRISGTDATNFFAFSNLSRHDLKQV 56