Jatropha Genome Database

JcCB0696011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0696011.10 - phase: 1 /partial
         (83 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29982.m000222 group II plp decarboxylase, putative                    141   6e-35

>29982.m000222 group II plp decarboxylase, putative
          Length = 471

 Score =  141 bits (356), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 72/77 (93%)

Query: 7   ETNKNGREIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTLMERTKHHLGY 66
           E  +N REIVLG+N+HT CLEVTEPDA+DE TGDK+AYMASVLARYRKTL+ERTK+HLGY
Sbjct: 38  EVVENEREIVLGKNVHTSCLEVTEPDADDELTGDKDAYMASVLARYRKTLIERTKYHLGY 97

Query: 67  PYNLDFDYGALGQLQHF 83
           PYNLDFDYGALGQLQHF
Sbjct: 98  PYNLDFDYGALGQLQHF 114