Jatropha Genome Database

JcCB0693601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693601.10 + phase: 0 
         (333 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003848 s-adenosylmethionine decarboxylase, putative            523   e-149
29673.m000902 s-adenosylmethionine decarboxylase, putative            429   e-120
27772.m000038 s-adenosylmethionine decarboxylase, putative            324   4e-89
29726.m003938 s-adenosylmethionine decarboxylase, putative            217   7e-57

>30138.m003848 s-adenosylmethionine decarboxylase, putative
          Length = 361

 Score =  523 bits (1346), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/313 (80%), Positives = 280/313 (89%), Gaps = 2/313 (0%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MAVSAIGFEGYEKRLEI+FFE G+FVDPEGKGLR+LSKAQLD  LGPAECTIVDSL N++
Sbjct: 6   MAVSAIGFEGYEKRLEISFFELGMFVDPEGKGLRSLSKAQLDMILGPAECTIVDSLSNEN 65

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           VDSYVLSESSLF+YPYK+IIKTCG              ++ALSL VKSVRYTRGSFIFPG
Sbjct: 66  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLAIPPILKLADALSLNVKSVRYTRGSFIFPG 125

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDLVY 180
           AQSYPHRSF+EEVAVLDDYFGKLG GS AYVMGG  S  PQKWHVYSA A S    D VY
Sbjct: 126 AQSYPHRSFSEEVAVLDDYFGKLGAGSTAYVMGGLHS--PQKWHVYSASAHSTYCCDCVY 183

Query: 181 TVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIEG 240
           T+EMCMTGL+R+KA+VFFK++SASAAVMTVDSGIR+ILP+SKICDFDFDPCGYSMN+IEG
Sbjct: 184 TIEMCMTGLEREKASVFFKSQSASAAVMTVDSGIRRILPNSKICDFDFDPCGYSMNAIEG 243

Query: 241 SAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQL 300
           +AISTIHITPEDGFSYASFETVGY+PEEVNLNQLV+RVL+CFQPSQFSIAVHA+VA KQL
Sbjct: 244 AAISTIHITPEDGFSYASFETVGYNPEEVNLNQLVERVLACFQPSQFSIAVHANVADKQL 303

Query: 301 MRTCSLDVKGYCR 313
           ++TC+LDVKGYCR
Sbjct: 304 VQTCALDVKGYCR 316


>29673.m000902 s-adenosylmethionine decarboxylase, putative
          Length = 359

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/311 (66%), Positives = 249/311 (80%), Gaps = 4/311 (1%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           ++V  IGFEGYEKRLE++F EPG F DP G GLR+LSK+QLDE L PAECTIVDSL NDH
Sbjct: 3   LSVPPIGFEGYEKRLEVSFSEPGFFADPGGMGLRSLSKSQLDEILKPAECTIVDSLSNDH 62

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           VDSYVLSESSLF+YPYKL+IKTCG              ++ LSL V SVRYTRGSFIFP 
Sbjct: 63  VDSYVLSESSLFVYPYKLMIKTCGTTKLLLSIPAILKLADTLSLSVSSVRYTRGSFIFPS 122

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDLVY 180
           AQ++PHRSF+EEVAVLD +FGKLG  S+AYVMG  D    +KWH YSA  D       +Y
Sbjct: 123 AQTFPHRSFSEEVAVLDGHFGKLGLESVAYVMGSPDET--RKWHAYSAAIDERCHSSPIY 180

Query: 181 TVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIEG 240
           T+EMCMTGLDR++A+VF+KT ++SAAVMT DSGIRKILP S+ICDFDFDPCGYSMN++EG
Sbjct: 181 TLEMCMTGLDRERASVFYKTHTSSAAVMTEDSGIRKILPQSEICDFDFDPCGYSMNAVEG 240

Query: 241 SAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQL 300
            AISTIHITPEDGFSYASFE++GY+ EEVNL QL++RVL+CF+P++FSIA+H+++   +L
Sbjct: 241 DAISTIHITPEDGFSYASFESMGYNFEEVNLTQLLERVLACFEPTEFSIALHSNIVHDEL 300

Query: 301 MRTCSLDVKGY 311
                 DVKGY
Sbjct: 301 --KFFPDVKGY 309


>27772.m000038 s-adenosylmethionine decarboxylase, putative
          Length = 301

 Score =  324 bits (830), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/291 (54%), Positives = 203/291 (69%), Gaps = 13/291 (4%)

Query: 4   SAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDHVDS 63
           S IGFEG+EKRLEI F EP IF DP G+GLRALS++QLD  L PA CTIV  L N+  DS
Sbjct: 9   SPIGFEGFEKRLEIAFQEPPIFKDPTGRGLRALSRSQLDSILEPACCTIVSQLSNNQFDS 68

Query: 64  YVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPGAQS 123
           YVLSESSLF+YP+K+++KTCG              +++LS+ V  V+Y+RG+FIFP  Q 
Sbjct: 69  YVLSESSLFVYPFKIVLKTCGTTKLLLSIKPILSLADSLSVAVTHVQYSRGTFIFPNYQP 128

Query: 124 YPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAI---SRDLVY 180
            PHRSF+EEV  L+++F  L    +AYV+G         WH+YSA     +   +R  + 
Sbjct: 129 APHRSFSEEVTTLNEFFSHL--NPLAYVIG--------DWHIYSASQSEPLMRGNRTDMA 178

Query: 181 TVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIEG 240
           TVE+CMTGL+++KAAVFFK+   +A+ MT  SGIR I+P   ICDFDFDPCGYSMN I+G
Sbjct: 179 TVEICMTGLEKKKAAVFFKSSGNTASEMTKISGIRDIIPSHVICDFDFDPCGYSMNGIDG 238

Query: 241 SAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAV 291
           S  ST+H+TPEDGFSYAS+E +G    E+ LN L+ RVL CF P QFS+AV
Sbjct: 239 SGYSTVHVTPEDGFSYASYEALGLDYGEIKLNPLIKRVLKCFGPKQFSVAV 289


>29726.m003938 s-adenosylmethionine decarboxylase, putative
          Length = 342

 Score =  217 bits (552), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 177/301 (58%), Gaps = 17/301 (5%)

Query: 1   MAVSAIGFEGYEKRLEITFF-EPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKND 59
           MAVS  GFEG+EKRLE+ FF +  + VD    GLR L    L   L   +CT+V ++ N 
Sbjct: 1   MAVS--GFEGFEKRLELHFFGDDPVMVD--NMGLRLLEFESLVNVLNAVQCTVVSAVGNQ 56

Query: 60  HVDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFP 119
           + D+YVLSESSLF+YP K+IIKTCG              +  L L + S RYTRG+FIFP
Sbjct: 57  YFDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLLHYACNLGLSLCSCRYTRGNFIFP 116

Query: 120 GAQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAY-ADSAISRDL 178
            +Q +PH SF EEV  L++          A VM    +     WHV++A   +  IS++ 
Sbjct: 117 KSQPFPHTSFKEEVIYLEETLPSNLCYRKASVMPSKMTS--HSWHVFTASDQNHFISQNH 174

Query: 179 -VYTVEMCMTGLDRQKAAVFF------KTRSASAAVMTVDSGIRKILPDSKICDFDFDPC 231
            +YT+E+CMT LDR  A  FF      K    +   MT  +GI  I P + ICDF FDPC
Sbjct: 175 HLYTIEVCMTELDRVLARKFFQPAGDGKNGDVAGKEMTKLTGIGDINPGAIICDFAFDPC 234

Query: 232 GYSMNSIEGSAISTIHITPEDGFSYASFETVG--YHPEEVNLNQLVDRVLSCFQPSQFSI 289
           GYSMN I+    STIH+TPEDG+SYASFE VG  +   + ++ +++ +V+  F+P+  S+
Sbjct: 235 GYSMNGIDSDRYSTIHVTPEDGYSYASFECVGSIFDDSDDDVAEVLKKVVQVFRPATMSV 294

Query: 290 A 290
           +
Sbjct: 295 S 295