Jatropha Genome Database

JcCB0693201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693201.10 - phase: 0 /partial
         (127 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m009012 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   210   1e-55
30147.m014473 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   110   2e-25
30174.m009085 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   109   3e-25
30138.m003944 Alpha-1,4-glucan-protein synthase [UDP-forming], p...   107   1e-24

>30128.m009012 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 351

 Score =  210 bits (534), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 96/127 (75%), Positives = 113/127 (88%)

Query: 1   MSVTNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNV 60
           MSV NIKD+DVDI+IGAL  DLTSF NEWR IFSRF LIIVKDPDLNEELKIPEGFNL+V
Sbjct: 1   MSVANIKDSDVDIVIGALRPDLTSFMNEWRSIFSRFHLIIVKDPDLNEELKIPEGFNLDV 60

Query: 61  YTKSHIDQVVGPSNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQH 120
           Y+KSHI+++ G + S LFSGY+CRYFGF++SRKKYI+S+D+DC PAKD+K FL++AV QH
Sbjct: 61  YSKSHIERLTGSTTSALFSGYACRYFGFIISRKKYIVSIDEDCVPAKDDKGFLIDAVAQH 120

Query: 121 IMNLTAP 127
           I NLTAP
Sbjct: 121 ITNLTAP 127


>30147.m014473 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 362

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 81/120 (67%), Gaps = 3/120 (2%)

Query: 9   NDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTKSHIDQ 68
           +++DI+I  + +    F   WRP F  + LIIV+D D N+ +++P+GF+  +Y ++ +++
Sbjct: 14  DELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPNKTVRVPDGFDYELYNRNDVNR 71

Query: 69  VVGP-SNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIMNLTAP 127
           V+GP SN I F   +CR FGFL+S+KKYI ++DDDCF AKD     +NA+ QHI NL  P
Sbjct: 72  VLGPKSNCISFKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKEINALAQHIQNLLTP 131


>30174.m009085 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 363

 Score =  109 bits (273), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 84/125 (67%), Gaps = 3/125 (2%)

Query: 4   TNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTK 63
           T +  +++DI+I  + +    F   WRP F ++ LIIV+D D ++ +K+PEGF+  +Y +
Sbjct: 10  TPLLKDELDIVIPTIRN--LDFLEMWRPFFEQYHLIIVQDGDPSKTIKVPEGFDYELYNR 67

Query: 64  SHIDQVVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIM 122
           + I++++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     +NA++QHI 
Sbjct: 68  NDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGQEINALEQHIK 127

Query: 123 NLTAP 127
           NL  P
Sbjct: 128 NLLTP 132


>30138.m003944 Alpha-1,4-glucan-protein synthase [UDP-forming],
           putative
          Length = 361

 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 85/128 (66%), Gaps = 3/128 (2%)

Query: 1   MSVTNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNV 60
           +S T +  +++DI+I  + +    F   WRP F  + LIIV+D D ++ +K+PEGF+  +
Sbjct: 7   ISPTPLLKDELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYEL 64

Query: 61  YTKSHIDQVVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQ 119
           Y ++ I++++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     +NA++Q
Sbjct: 65  YNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQ 124

Query: 120 HIMNLTAP 127
           HI NL  P
Sbjct: 125 HIKNLLCP 132