Jatropha Genome Database

JcCB0691211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0691211.10 + phase: 0 
         (84 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008934 mads box protein, putative                              114   1e-26
30138.m003939 mads box protein, putative                              106   3e-24
29648.m001978 mads box protein, putative                               99   4e-22
30147.m014133 mads box protein, putative                               96   3e-21
29596.m000699 mads box protein, putative                               92   5e-20
30221.m002218 mads box protein, putative                               89   3e-19
29907.m000663 mads box protein, putative                               89   5e-19
29908.m005982 mads box protein, putative                               89   6e-19
29804.m001536 mads box protein, putative                               88   1e-18
29782.m000119 Floral homeotic protein DEFICIENS, putative              87   1e-18
30170.m013776 mads box protein, putative                               85   6e-18
29838.m001690 mads box protein, putative                               83   3e-17
30138.m004061 mads box protein, putative                               72   7e-14
29693.m002039 mads box protein, putative                               67   2e-12
28348.m000077 mads box protein, putative                               66   4e-12
30099.m001672 mads box protein, putative                               65   5e-12
29693.m002042 mads box protein, putative                               65   9e-12
27866.m000233 mads box protein, putative                               65   1e-11
29693.m002041 mads box protein, putative                               63   2e-11
29813.m001508 mads box protein, putative                               63   3e-11
29613.m000367 mads box protein, putative                               62   5e-11
29838.m001672 mads box protein, putative                               62   7e-11
28830.m000229 mads box protein, putative                               60   2e-10
30099.m001671 mads box protein, putative                               60   2e-10
29912.m005524 mads box protein, putative                               55   8e-09
29739.m003627 mads box protein, putative                               54   1e-08
27893.m000228 mads box protein, putative                               51   1e-07
30190.m010925 conserved hypothetical protein                           50   2e-07
28180.m000391 mads box protein, putative                               49   4e-07
29838.m001673 mads box protein, putative                               47   1e-06
29653.m000299 mads box protein, putative                               47   1e-06

>30174.m008934 mads box protein, putative
          Length = 244

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57


>30138.m003939 mads box protein, putative
          Length = 244

 Score =  106 bits (264), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/61 (78%), Positives = 57/61 (93%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + 
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 99.4 bits (246), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 56/61 (91%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          MGRGR+E+KRIEN  NRQVT++KRRNG++KKA E++VLCDAEV+LIIF++ GK++E+CS 
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEYCSP 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 95.9 bits (237), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/59 (72%), Positives = 53/59 (89%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
          M RG+++++RIEN  +RQVTF+KRRNGLLKKAYELSVLCDAEVA+IIFS +G+L EF S
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFAS 59


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 92.0 bits (227), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 54/61 (88%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          MGRG++ ++RI+N  +RQVTF+KRRNGLLKKA EL++LCDAEV ++IFS+ GKLY+F S+
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSSS 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 89.4 bits (220), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 51/59 (86%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
          MGRG++ +KRIEN+  RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS+ GK+ ++C+
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCT 59


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 88.6 bits (218), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/59 (67%), Positives = 49/59 (83%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
          M RG+V++KRIEN ++RQVTF KRR+GLLKKA ELSVLCDAE+ L IFS  GKLY+  +
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLAT 59


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 88.6 bits (218), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          MGR ++E+KRIEN  NRQVTF+KRRNGL+KKAYELS+LCD ++ALI+FS  G+L  F   
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFSGR 60

Query: 61 SRYD 64
           R +
Sbjct: 61 KRIE 64


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 53/61 (86%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          MGRG++ ++RI+N  +RQVTF+KRRNGLLKKA ELS+LCDAEV +IIFS+  KLY++ ST
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87

Query: 61 S 61
          S
Sbjct: 88 S 88


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 52/60 (86%), Gaps = 1/60 (1%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-KLYEFCS 59
          MGRG++E+K+IEN  NRQVT++KRRNG+ KKA EL+VLCDA+V+LI+FSN G K +EF S
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKFHEFIS 60


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 85.1 bits (209), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 49/57 (85%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          MGR ++++KRIEN  NRQVTF+KRRNGL+KKAYELSVLCD +VALI+FS  G+L  F
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLF 57


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 49/60 (81%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
          M R ++++K+I+N   RQVTF+KRR GL KKAYELS LCDAE+AL++FS  GKL+E+ S+
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYASS 60


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 71.6 bits (174), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/53 (58%), Positives = 44/53 (83%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
          MGR ++++KR+E+  NRQVT++KRRNG+LKKA ELS+LCD  + L++FS  GK
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 44/57 (77%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          MGR ++E+K +++  +RQVTF+KRR GL KKA EL+ LC A++A+++FS  GK + F
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSF 57


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 65.9 bits (159), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 43/54 (79%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLY 55
          GR ++E+K++EN   R VTF+KR++G+ KKA ELS LC AE+A+++FS  GK++
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 43/56 (76%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          GR ++++ ++ N+ N QVTF+KRR+GL KKA ELS LC AE+A+I+FS   K++ F
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 43/60 (71%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTS 61
          GR ++ +KRIEN+ +R +TF+KRR+G+ KKA EL  LC AEV +++FS  GK + F   S
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGHPS 68


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 42/56 (75%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          GR ++E+K IE K N QVTF+KRR GL KKA ELS+LC A+VA++ FS   K++ F
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 63.2 bits (152), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 43/60 (71%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTS 61
          GR ++E+K+IEN+ +R +TF+KRR+G+ KKA EL  L  AE+A +++S  GK + F   S
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFAHPS 71


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 42/53 (79%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
          MGR ++++K++EN   RQ T+ KR++G++KKA ELS+LCD ++ L++FS  GK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 62.0 bits (149), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 40/57 (70%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          +GR ++ +++I  K + QVTF+KRR GL KKA EL  LC  E+A+I+FS  GK + F
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 61.6 bits (148), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 42/60 (70%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTS 61
          GR R+E+ +I  + NR VTF+KRR G+ KKA ELS LC AE+++I+FS   + + F + S
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGNPS 67


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 60.1 bits (144), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          MGR + ++  I+ +  RQV+F+KRR G+ KKA EL  LC  E A++IFS  GK + F
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 60.1 bits (144), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 39/57 (68%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 57
          +GR ++ +++I  K + QVTF+KRR GL KKA EL  LC  E+A+++FS   K + F
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 55.1 bits (131), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS----NRGKLYE 56
          MGRG++ ++ I N+ +R +T+ KR+ GL KK  E  +LCD +  +IIFS    NR    E
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSPKFNNRSFDIE 60

Query: 57 FCSTSRYD 64
             ++RY+
Sbjct: 61 TWPSNRYE 68


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 53.9 bits (128), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 39/53 (73%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
          MGR ++++ R+E+   RQV ++KR+ G+LKK  EL+ LCD ++ LI+FS  GK
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGK 53


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 4/54 (7%)

Query: 8  LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS----NRGKLYEF 57
          +K++E++  R V+F KRRNGL  KA EL +LCDA++A+++ S     + K+Y F
Sbjct: 9  MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSKPKRKVYSF 62


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 50.1 bits (118), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 34/53 (64%)

Query: 1  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGK 53
          MG  R++++ IE +  R +T+ KR+  L+KK  E S+LC  E  LIIF+ + K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 5  RVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSN-RGKLYEF 57
          ++ +K+ E K  R V+F KRR GL  KA EL +LCDA++AL++ S    K+Y F
Sbjct: 6  KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSPCSRKVYSF 59


>29838.m001673 mads box protein, putative
          Length = 214

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 2  GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTS 61
          G    E+  I  + N  VTF  RR G+ +KA E+S+L  AEV +++F    K++ FC TS
Sbjct: 7  GSQGFEMVNISKESNLLVTFLNRRFGVSRKADEVSILSGAEVTIVVFLPGNKVFSFCHTS 66


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 5  RVELKRI-ENKINRQVTFAKRRNGLLKKAYELSVL--CDAEVALIIFSNRGKLYEFCSTS 61
          ++E+K+I +NK    VTF+KRR GL KKA E   L    AEVALI FS  G+ + F   S
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSFGKPS 88