Jatropha Genome Database

JcCB0684951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0684951.10 - phase: 0 /partial
         (139 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006861 serine palmitoyltransferase, putative                   229   3e-61

>30131.m006861 serine palmitoyltransferase, putative
          Length = 488

 Score =  229 bits (584), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 117/139 (84%), Positives = 120/139 (86%), Gaps = 1/139 (0%)

Query: 1   ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSNRGAQKLARIRENSNFFRSE 60
           ELIQYLKYTCPAHLYATSISPPAAEQIIS+IKVILGEDGSNRGAQKLARIRENSNFFRSE
Sbjct: 325 ELIQYLKYTCPAHLYATSISPPAAEQIISSIKVILGEDGSNRGAQKLARIRENSNFFRSE 384

Query: 61  LIKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICI 120
           L KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE   +             LLLARARICI
Sbjct: 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE-XXKGVAVVTVAFPATPLLLARARICI 443

Query: 121 SASHTKEDLIKALEVNSVI 139
           SASHTKEDLIKALEV S +
Sbjct: 444 SASHTKEDLIKALEVISQV 462