Jatropha Genome Database

JcCB0682701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0682701.10 - phase: 0 /partial
         (98 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29840.m000629 Phospholipase A21                                       155   5e-39
29912.m005406 Phospholipase A23                                        69   6e-13

>29840.m000629 Phospholipase A21
          Length = 160

 Score =  155 bits (391), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 74/102 (72%), Positives = 85/102 (83%), Gaps = 4/102 (3%)

Query: 1   MANISQSLQLVAHLLAXXXXXX----XVPIHALNIGVQRADASVSVSKECSRKCESEFCS 56
           MAN+SQ L LVA+L              P+HALNIGVQ A++++++SKECSRKCESEFCS
Sbjct: 1   MANLSQPLNLVAYLFFFCFLLSLSFPSTPVHALNIGVQTANSAITLSKECSRKCESEFCS 60

Query: 57  VPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQAKN 98
           VPPFLRYGKYCGLLYSGCPGE+PCDGLDACCMKHD+CVQAKN
Sbjct: 61  VPPFLRYGKYCGLLYSGCPGEKPCDGLDACCMKHDSCVQAKN 102


>29912.m005406 Phospholipase A23
          Length = 150

 Score = 68.6 bits (166), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 2/63 (3%)

Query: 36 ADASVSVSK-ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACV 94
          AD++ + S+ +CSR C ++ C+    +RYGKYCG+ ++GCPGE+PCD LDACC  HD CV
Sbjct: 30 ADSANNYSQVKCSRTCVAQNCN-SVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDDCV 88

Query: 95 QAK 97
          + K
Sbjct: 89 EKK 91