Jatropha Genome Database

JcCB0682391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0682391.10 - phase: 2 /partial
         (359 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013805 hmg-CoA reductase, putative                             589   e-169
29682.m000571 hmg-CoA reductase, putative                             489   e-139
30162.m001288 hmg-CoA reductase, putative                             473   e-134

>30170.m013805 hmg-CoA reductase, putative
          Length = 576

 Score =  589 bits (1518), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/340 (83%), Positives = 305/340 (89%), Gaps = 8/340 (2%)

Query: 1   IFFTLFFSVAYYLLHRWRDKIRNSTPLHIVTLSEIAAIVSLIASFIYLLGFFGIDFVQSF 60
           IFFTLFFSVAYYLLHRWRDKIRNSTPLH++TLSEIAAIVSLIASFIYLLGFFGIDFVQSF
Sbjct: 52  IFFTLFFSVAYYLLHRWRDKIRNSTPLHVLTLSEIAAIVSLIASFIYLLGFFGIDFVQSF 111

Query: 61  IARASHDAWDLDDTDPAYLINEDHRLVTCXXXXXXXXXXXXXKLPPPDLIVAPLASEDDE 120
           I RASH++WDLD  DP YLI EDHRLVTC             KLP  + I+  LASE+DE
Sbjct: 112 ITRASHESWDLDGADPDYLIREDHRLVTCPPIPS--------KLPISESIITRLASEEDE 163

Query: 121 NIVKSVVNGTIPSYSLESKLGDCKRAATIRREALQRTTGRSLDGLPVDGFDYESILGQCC 180
            IVKSVVNGTIPSYSLESKLGDCKRAATIRREALQR  GRSL+GLP++GFDYESILGQCC
Sbjct: 164 EIVKSVVNGTIPSYSLESKLGDCKRAATIRREALQRMMGRSLEGLPLEGFDYESILGQCC 223

Query: 181 EMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIYLSGGATSVLLKDC 240
           EMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAI+LSGGA SVLLKD 
Sbjct: 224 EMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIHLSGGANSVLLKDG 283

Query: 241 MTRAPVVRFESVTRAADLKFFLENPENFDTLAVVFNRSSRFARLQGVKCAIAGKNVYVRF 300
           MTRAPVVRF S  RAA+LKFFLENPENFDTL+VVFNRSSRFA+LQ ++CAIAGKN+Y+RF
Sbjct: 284 MTRAPVVRFGSAARAAELKFFLENPENFDTLSVVFNRSSRFAKLQAIQCAIAGKNLYMRF 343

Query: 301 SCSTGDAMGMNMVSKGVQNVLEFLKNDFPDMRLAGISGKF 340
           SCSTGDAMGMNMVSKGVQNVL+FL+NDFPDM + GISG F
Sbjct: 344 SCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNF 383


>29682.m000571 hmg-CoA reductase, putative
          Length = 576

 Score =  489 bits (1259), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 237/349 (67%), Positives = 279/349 (79%), Gaps = 18/349 (5%)

Query: 1   IFFTLFFSVAYYLLHRWRDKIRNSTPLHIVTLSEIAAIVSLIASFIYLLGFFGIDFVQSF 60
           +FF+LFFSVAY+LLHRWR+KIRNSTPLHI+T  EIAA+  L+AS IYLLGFFGI FVQSF
Sbjct: 44  VFFSLFFSVAYFLLHRWREKIRNSTPLHILTFPEIAALFCLVASVIYLLGFFGIGFVQSF 103

Query: 61  IARASHDAWD---------LDDTDPAYLINEDHRLVTCXXXXXXXXXXXXXKLPPPDLIV 111
            ++   + +D         L    PA L N++                    +PP  L  
Sbjct: 104 TSKDIVEDYDHNILKQETRLPGPCPASLDNDN---------VPPLKPKTTKAVPPNTLAP 154

Query: 112 APLASEDDENIVKSVVNGTIPSYSLESKLGDCKRAATIRREALQRTTGRSLDGLPVDGFD 171
            P  S DD+ I+ SV++G++PSYSLESKLGDCKRAA IRREALQR TGRSL+GLP+DGFD
Sbjct: 155 PPTLSSDDDEIINSVLSGSLPSYSLESKLGDCKRAAAIRREALQRMTGRSLEGLPLDGFD 214

Query: 172 YESILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIYLSGG 231
           YESILGQCCEMP+GYVQIPVGIAGPLLLDG EY+VPMATTEGCLVASTNRGCKAIY+SGG
Sbjct: 215 YESILGQCCEMPIGYVQIPVGIAGPLLLDGNEYTVPMATTEGCLVASTNRGCKAIYVSGG 274

Query: 232 ATSVLLKDCMTRAPVVRFESVTRAADLKFFLENPENFDTLAVVFNRSSRFARLQGVKCAI 291
           ATS LL+D MTRAPVVRF++  RAA+LKFF+E+P NFDT+A+VFN+SSRF RLQ V+CAI
Sbjct: 275 ATSTLLRDGMTRAPVVRFQTAQRAAELKFFMEDPNNFDTIALVFNKSSRFGRLQSVQCAI 334

Query: 292 AGKNVYVRFSCSTGDAMGMNMVSKGVQNVLEFLKNDFPDMRLAGISGKF 340
           AGKN+Y+RF CSTGDAMGMNMVSKGVQNVL++L+N+FPDM + GISG F
Sbjct: 335 AGKNLYMRFRCSTGDAMGMNMVSKGVQNVLDYLQNEFPDMDVIGISGNF 383


>30162.m001288 hmg-CoA reductase, putative
          Length = 586

 Score =  473 bits (1217), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/350 (67%), Positives = 269/350 (76%), Gaps = 14/350 (4%)

Query: 1   IFFTLFFSVAYYLLHRWRDKIRNSTPLHIVTLSEIAAIVSLIASFIYLLGFFGIDFVQSF 60
           I FTLFFSV Y+LL RWR+KIR STPLH+VTLSEIAAI   IASFIYLLGFFG DFVQS 
Sbjct: 46  ICFTLFFSVVYFLLSRWREKIRTSTPLHVVTLSEIAAIFGFIASFIYLLGFFGFDFVQSL 105

Query: 61  IAR--ASHDAWDLDDTDPAYLINEDHRLVTCXXXXXXXXXXXXXKLPPPDLIVAPLA--- 115
           I R     D W+++D     L+ +D R  +C                P  +   P A   
Sbjct: 106 ILRPPTDDDVWEVEDA----LLKDDSRRFSCGQALDCSLSSPPQPPKPKVVEEIPTAISS 161

Query: 116 -----SEDDENIVKSVVNGTIPSYSLESKLGDCKRAATIRREALQRTTGRSLDGLPVDGF 170
                 E+DE I++SVV+G  PSYSLESKLGDCKRAA IRR AL+R TG+SL GLP++GF
Sbjct: 162 TTFDLGEEDEEIIRSVVDGKTPSYSLESKLGDCKRAAAIRRLALERITGKSLSGLPLEGF 221

Query: 171 DYESILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIYLSG 230
           DY SILGQCCEMP+GYVQIPVGIAGPLLLDG+EYSVPMATTEGCLVASTNRGCKAI+LSG
Sbjct: 222 DYNSILGQCCEMPIGYVQIPVGIAGPLLLDGKEYSVPMATTEGCLVASTNRGCKAIHLSG 281

Query: 231 GATSVLLKDCMTRAPVVRFESVTRAADLKFFLENPENFDTLAVVFNRSSRFARLQGVKCA 290
           GATSVLL+D MTRAPVVRF +  RAA LK +LE+P NFD ++  FN+SSRF RLQ +KCA
Sbjct: 282 GATSVLLRDGMTRAPVVRFGTAKRAAQLKLYLEDPSNFDVISSAFNKSSRFGRLQNIKCA 341

Query: 291 IAGKNVYVRFSCSTGDAMGMNMVSKGVQNVLEFLKNDFPDMRLAGISGKF 340
           IAGKN+Y+RF CSTGDAMGMNMVSKGVQNVL+FL+N FPDM + GISG F
Sbjct: 342 IAGKNLYLRFCCSTGDAMGMNMVSKGVQNVLDFLQNHFPDMDVIGISGNF 391