Jatropha Genome Database

JcCB0678661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0678661.10 - phase: 0 /pseudo/partial
         (335 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001316 ATP binding protein, putative                           428   e-120

>29780.m001316 ATP binding protein, putative
          Length = 2970

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/343 (69%), Positives = 278/343 (81%), Gaps = 11/343 (3%)

Query: 1    NAENGLLQHGLCESNTIIADLRENNSKSSKDLQMCRNLKGKLLADIKNSFDRILRKEEET 60
            NAENGLLQHGLCESNTIIA LRE+NS+SS++LQMCR LKGKLLADIKNSFDRILRKEEET
Sbjct: 1733 NAENGLLQHGLCESNTIIAGLREHNSRSSRELQMCRTLKGKLLADIKNSFDRILRKEEET 1792

Query: 61   GDLSTKLTTFEKKIFDLQLQEESMLQRSNYMGSQLSILMQDLDFSNRNIAQSLIDQEKIL 120
            G+L+T++TTFEKKIFDLQLQEE MLQRSNYMGSQLSILM+DLDF NRNI +SL+ QEK+L
Sbjct: 1793 GELNTRITTFEKKIFDLQLQEEIMLQRSNYMGSQLSILMKDLDFGNRNI-ESLLGQEKML 1851

Query: 121  TEKEVLLNSQAELFLTDFCSKDIESLVLASQLEEMSLQKDEAEKENRSYASVLETLKEEM 180
             + E LLNSQAELF+ + CSKDIESLVLA+QLEEMS +KD A++E+    S+LE++KE+M
Sbjct: 1852 KDNEELLNSQAELFMVELCSKDIESLVLATQLEEMSFKKDAAKREHNECGSILESVKEQM 1911

Query: 181  VLLMVDGELKEQVLLAKDTEVQDLLS------WLNQG-HLRITEMNEVNRSLEGEIQLLK 233
            +LLMVDGELKE VL+AKD E+  L        W  Q    RITEM+EVN +LE EI LLK
Sbjct: 1912 ILLMVDGELKEAVLMAKDAEIALLKEKVAEALWEAQYLQSRITEMDEVNEALELEIHLLK 1971

Query: 234  DAACSNDVLKGELDEVMESKARLLIQIQELEADREKLLNDLKTKEIALDGSSSHISILDQ 293
            D ACSND LKGEL EV E+KARLL QIQ LE + EKLL +LKTKE ALD SSSHIS+LDQ
Sbjct: 1972 DDACSNDALKGELGEVKETKARLLNQIQALETEYEKLLKELKTKETALDCSSSHISVLDQ 2031

Query: 294  QNQKLQKDICLLETLSS-VHTN*TRQER**NLDRMSGVEDENE 335
            QNQK Q +I LLET SS + T    ++    L RMS +E+ENE
Sbjct: 2032 QNQKSQMEIRLLETSSSTLQTELDDKDA--ELCRMSWLEEENE 2072