Jatropha Genome Database

JcCB0645811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0645811.10 - phase: 0 /pseudo
         (103 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014050 sugar transporter, putative                             134   9e-33
29634.m002113 sugar transporter, putative                             127   1e-30

>30170.m014050 sugar transporter, putative
          Length = 487

 Score =  134 bits (337), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 66/93 (70%), Positives = 75/93 (80%), Gaps = 3/93 (3%)

Query: 1  MTSREEGDDG---LRKPFLHTGSWYKMGSRQSSIMGSSTQIRDGAVSVVLCVLIVALGPI 57
          M+ R++ +D    LRKPFLHTGSWY+MGSRQSS+MGSS  IRD ++SVV CVLIVALGPI
Sbjct: 1  MSFRDDSEDARGDLRKPFLHTGSWYRMGSRQSSMMGSSQVIRDSSISVVACVLIVALGPI 60

Query: 58 QFGFTCGYSSPTQAEIIKDLKLSISEVRLIGFL 90
          QFGFTCGYSSPTQ  I  DLKLS+SE  L G L
Sbjct: 61 QFGFTCGYSSPTQTAITDDLKLSVSEYSLFGSL 93


>29634.m002113 sugar transporter, putative
          Length = 486

 Score =  127 bits (318), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%), Gaps = 2/92 (2%)

Query: 1  MTSREE-GDDGLRKPFLHTGSWYKMGSRQSSIMGSSTQ-IRDGAVSVVLCVLIVALGPIQ 58
          MTSREE GDDG+RKP LHTGSWY+M SRQSS+MGSS+Q IRDGAVSVVLCVLIVALGPIQ
Sbjct: 1  MTSREEAGDDGVRKPLLHTGSWYRMSSRQSSMMGSSSQYIRDGAVSVVLCVLIVALGPIQ 60

Query: 59 FGFTCGYSSPTQAEIIKDLKLSISEVRLIGFL 90
          FGFTCGYSSPTQAEII+DL LSISE  L G L
Sbjct: 61 FGFTCGYSSPTQAEIIRDLNLSISEFSLFGSL 92