Jatropha Genome Database

JcCB0644101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0644101.10 + phase: 1 /partial
         (213 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013966 polyamine oxidase, putative                             335   8e-93
29864.m001459 polyamine oxidase, putative                             119   1e-27

>30147.m013966 polyamine oxidase, putative
          Length = 483

 Score =  335 bits (859), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 160/214 (74%), Positives = 182/214 (85%), Gaps = 1/214 (0%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFGGGPVFNPXXXXXX 60
           I AAK++HEAGIQDILILEA+ RIGGRLMKTQFSG TVE G NWLF GGPV NP      
Sbjct: 39  IAAAKTLHEAGIQDILILEATPRIGGRLMKTQFSGYTVEMGCNWLFTGGPVANPLIDMAK 98

Query: 61  XXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFCAAFSKKLSVQKKDID 120
                   +D++NITSNTYKQ GGLYPK+ VE++  VATA DDFC  FS+KLS +KKD+D
Sbjct: 99  KLKLRTFYSDFENITSNTYKQEGGLYPKKQVEEVSGVATARDDFCVKFSQKLSAKKKDVD 158

Query: 121 VSILAAQRIF-KKAPTSPLEMVIDYYHNDFEDAEPPKVTSLKHTYPRNELVDHGEDEYFV 179
           VSILAAQRI+ K+ PTSPLEMVID+++NDFEDAEPPKVTSLKHTYPRNE+VDHGEDEYFV
Sbjct: 159 VSILAAQRIYNKRPPTSPLEMVIDFFYNDFEDAEPPKVTSLKHTYPRNEMVDHGEDEYFV 218

Query: 180 ADPRGFEIIVQYLAKQFLSSLTKDPRLKLNKVIR 213
           ADPRG E++VQYLAKQFLSS+TKDPRLKLNKV+R
Sbjct: 219 ADPRGVEVLVQYLAKQFLSSVTKDPRLKLNKVVR 252


>29864.m001459 polyamine oxidase, putative
          Length = 493

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 23/217 (10%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFG-GGPVFNPXXXXX 59
           ++AAK + E GI+D++ILEAS RIGGR+ K  F G++VE GA W+ G GG   NP     
Sbjct: 19  LSAAKVLAENGIEDVVILEASDRIGGRIKKESFGGVSVELGAGWIAGVGGKESNPVWELA 78

Query: 60  XXXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFCAAFSKKLSVQKKDI 119
                    +DY N   N Y ++G ++P  V    D    A+D        KL  Q+ ++
Sbjct: 79  NQSGLRTCFSDYSNARYNIYDRSGKIFPSGVAA--DSYKKAVDSAIM----KLRSQEANL 132

Query: 120 DVSILAAQRIFKKAPTSPLEMVIDYYHNDFEDAEPPKVTSLKHTYPRNELVDHGEDEYFV 179
              ++        +P +P+E+ ID+  +DFE AE           P +  VD GE E+ V
Sbjct: 133 VGEVIEP----PCSPKTPIELAIDFILHDFEMAE---------VEPISTYVDFGEREFLV 179

Query: 180 ADPRGFEIIVQYLAKQFL-SSLTK--DPRLKLNKVIR 213
           AD RG+E ++  +A+ FL +S  K  D RLKLNKV+R
Sbjct: 180 ADERGYEYLLYKIAEDFLFTSEGKILDTRLKLNKVVR 216