Jatropha Genome Database

JcCB0643441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0643441.10 - phase: 0 /partial
         (113 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002458 Protein ariadne-1, putative                             189   3e-49
30170.m013978 Protein ariadne-1, putative                              64   1e-11

>29851.m002458 Protein ariadne-1, putative
          Length = 592

 Score =  189 bits (479), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/118 (85%), Positives = 104/118 (88%), Gaps = 5/118 (4%)

Query: 1   PFEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEK 60
           PFEQY DDKV +IRMQVINL A+TDTLCKKMYECIE+DLLGSLQLGTHNIAPYKSKGIEK
Sbjct: 461 PFEQYTDDKVMEIRMQVINLCAITDTLCKKMYECIENDLLGSLQLGTHNIAPYKSKGIEK 520

Query: 61  ASELSSCWSNKVNATHKFLTSDGNASGGISELDRP-----SDDSGCSSRKRARKEGGG 113
           ASELSSCWSNKVNAT K L SDGN SGG SE DRP     SDDSGCSSRKRARKEGGG
Sbjct: 521 ASELSSCWSNKVNATDKCLPSDGNTSGGSSEHDRPSGSRSSDDSGCSSRKRARKEGGG 578


>30170.m013978 Protein ariadne-1, putative
          Length = 525

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 45/61 (73%)

Query: 2   FEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEKA 61
           F++Y +D++  +RM++I ++  TD LC+ +Y+ IE+DLLGS+    H IAPYKS+ + ++
Sbjct: 463 FDKYEEDEIVDLRMRIIAVSGSTDNLCRNLYDRIENDLLGSINGAFHRIAPYKSRNVLRS 522

Query: 62  S 62
           S
Sbjct: 523 S 523