Jatropha Genome Database

JcCB0634021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0634021.10 - phase: 0 /pseudo/partial
         (152 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001430 Serine acetyltransferase, putative                      166   3e-42
29912.m005391 Serine acetyltransferase, putative                       87   3e-18
29629.m001352 Serine acetyltransferase 3, mitochondrial precurso...    84   2e-17

>29830.m001430 Serine acetyltransferase, putative
          Length = 326

 Score =  166 bits (421), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/104 (79%), Positives = 91/104 (87%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGKEVGDRHPK+GDGALIGACATILGNI+IGEGAMIAAGSLVLK+VD HSMMAGT
Sbjct: 216 VTLGGTGKEVGDRHPKIGDGALIGACATILGNIQIGEGAMIAAGSLVLKDVDAHSMMAGT 275

Query: 96  PAKLIGYVVGKDPSLTMKHDASKEFFKLVAVTFKEGISSGKCKP 139
           PAK+IGYV  KDPSLTMKHDA+K FFK VAVTF+E   S   +P
Sbjct: 276 PAKVIGYVNEKDPSLTMKHDATKGFFKHVAVTFREERCSAPDQP 319


>29912.m005391 Serine acetyltransferase, putative
          Length = 296

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 51/66 (77%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA ATILGN+KIGEGA + AGS+VL +V P +   G 
Sbjct: 201 VTLGGTGKACGDRHPKIGDGVLIGAGATILGNVKIGEGAKVGAGSVVLIDVPPRTTAVGN 260

Query: 96  PAKLIG 101
           PA+L+G
Sbjct: 261 PARLVG 266


>29629.m001352 Serine acetyltransferase 3, mitochondrial precursor,
           putative
          Length = 396

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 55/84 (65%), Gaps = 5/84 (5%)

Query: 36  LTARGTGKEVGDRHPKVGDGALIGACATILGNIKIGEGAMIAAGSLVLKNVDPHSMMAGT 95
           +T  GTGK  GDRHPK+GDG LIGA   ILGNIKIG+GA I A S+VLK+V   +   G 
Sbjct: 301 VTLGGTGKTSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGACSVVLKDVPARTTAVGN 360

Query: 96  PAKLIG-----YVVGKDPSLTMKH 114
           PA+LIG       + K PS TM H
Sbjct: 361 PARLIGGKENPTKLDKIPSFTMDH 384