Jatropha Genome Database

JcCB0623091.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0623091.20 - phase: 0 /pseudo/partial
         (119 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006605 Cycloartenol synthase, putative                         171   8e-44
27446.m000472 Cycloartenol synthase, putative                         136   2e-33
29667.m000347 Cycloartenol synthase, putative                         123   2e-29
29693.m001997 cycloartenol synthase, putative                         121   6e-29
30169.m006606 Cycloartenol synthase, putative                         115   4e-27
29702.m000164 Cycloartenol synthase, putative                         115   6e-27
29588.m000889 Cycloartenol synthase, putative                          87   1e-18
29588.m000887 Cycloartenol synthase, putative                          76   4e-15

>30169.m006605 Cycloartenol synthase, putative
          Length = 744

 Score =  171 bits (432), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 85/96 (88%), Gaps = 1/96 (1%)

Query: 25  QKYVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITG 83
           +KYVALEGKR NLVHT W MMGL+ G +MDRDP PLH AA LIINSQLEDGDFPQQEITG
Sbjct: 649 KKYVALEGKRWNLVHTAWGMMGLINGGQMDRDPKPLHAAAKLIINSQLEDGDFPQQEITG 708

Query: 84  VFMKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
           VFMKNCMLHYAAYRNIYPLWALAEYRNRVPL S  I
Sbjct: 709 VFMKNCMLHYAAYRNIYPLWALAEYRNRVPLTSRTI 744


>27446.m000472 Cycloartenol synthase, putative
          Length = 757

 Score =  136 bits (343), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 74/94 (78%), Gaps = 1/94 (1%)

Query: 27  YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
           YV LE  RSNLVHT  AMMGL+ G +  RDPTPL+RAA L+INSQ E GDFPQQE  GVF
Sbjct: 664 YVPLEDNRSNLVHTAMAMMGLIHGGQAKRDPTPLYRAAKLLINSQTELGDFPQQEQIGVF 723

Query: 86  MKNCMLHYAAYRNIYPLWALAEYRNRVPLPSTPI 119
           M+NCMLHYAAYRNI+PLWALAEY   V LPS  I
Sbjct: 724 MRNCMLHYAAYRNIFPLWALAEYCQHVSLPSKNI 757


>29667.m000347 Cycloartenol synthase, putative
          Length = 753

 Score =  123 bits (308), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 75/94 (79%), Gaps = 3/94 (3%)

Query: 22  VAVQK--YVALEGKRSNLVHTTWAMMGLMGL-RMDRDPTPLHRAATLIINSQLEDGDFPQ 78
           ++ QK  Y  LEG RS++V+T WAM+ L+   + +RDPTPLHRAA  +IN+Q+E+GDFPQ
Sbjct: 656 LSCQKKVYSNLEGDRSHVVNTAWAMLSLIDAGQAERDPTPLHRAARYLINAQMENGDFPQ 715

Query: 79  QEITGVFMKNCMLHYAAYRNIYPLWALAEYRNRV 112
           QEI GVF +NCM+ YAAYR+I+P+WAL EYR RV
Sbjct: 716 QEIMGVFNRNCMITYAAYRDIFPIWALGEYRCRV 749


>29693.m001997 cycloartenol synthase, putative
          Length = 397

 Score =  121 bits (304), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 1/88 (1%)

Query: 26  KYVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGV 84
           +Y  LEG RS+LV T WAMMGL+   +++RDP PLH AA   INSQLE G+FPQQEI+G 
Sbjct: 304 EYTPLEGNRSHLVQTAWAMMGLIHAGQVERDPAPLHNAARFFINSQLETGEFPQQEISGA 363

Query: 85  FMKNCMLHYAAYRNIYPLWALAEYRNRV 112
            ++ CMLHYA+YRNI+PLWAL  YR  V
Sbjct: 364 SLRTCMLHYASYRNIFPLWALGLYRKYV 391


>30169.m006606 Cycloartenol synthase, putative
          Length = 757

 Score =  115 bits (289), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 1/87 (1%)

Query: 27  YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
           Y  L+  RSNLVHT WAM+GL+   +  RDPTP+HR A ++INSQ EDG FPQQEITG F
Sbjct: 670 YTPLKDGRSNLVHTAWAMLGLIQSGQTKRDPTPIHRGARVLINSQQEDGSFPQQEITGAF 729

Query: 86  MKNCMLHYAAYRNIYPLWALAEYRNRV 112
             N MLHY  Y++ +PLWALAEYR   
Sbjct: 730 KNNNMLHYPIYKDCFPLWALAEYRKHC 756


>29702.m000164 Cycloartenol synthase, putative
          Length = 352

 Score =  115 bits (287), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 27  YVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVF 85
           Y  LE  +S+ V T WAM+ L+   + +RDP PLHRAA ++INS LE GDFPQQEI GVF
Sbjct: 259 YTNLECNKSHNVSTGWAMLALIEAGQAERDPYPLHRAAKVLINSMLETGDFPQQEIMGVF 318

Query: 86  MKNCMLHYAAYRNIYPLWALAEYRNRVPLPS 116
            KNCM++Y+ YRNI+P+WAL EY   V LPS
Sbjct: 319 NKNCMINYSNYRNIFPIWALGEYLKHVILPS 349


>29588.m000889 Cycloartenol synthase, putative
          Length = 741

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 27/90 (30%)

Query: 27  YVALEGKRSNLVHTTWAMMGLMGLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITGVFM 86
           YV  EG RSNLV T WAMMGL+                           +  QE+TG FM
Sbjct: 668 YVPFEGNRSNLVQTAWAMMGLI---------------------------YGGQELTGAFM 700

Query: 87  KNCMLHYAAYRNIYPLWALAEYRNRVPLPS 116
           +NCMLHYA +RN +P+WALAEYR  V  PS
Sbjct: 701 RNCMLHYALFRNTFPIWALAEYRRHVLFPS 730


>29588.m000887 Cycloartenol synthase, putative
          Length = 679

 Score = 75.9 bits (185), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 3/67 (4%)

Query: 25  QKYVALEGKRSNLVHTTWAMMGLM-GLRMDRDPTPLHRAATLIINSQLEDGDFPQQEITG 83
           ++YV LEG RSNLVHT WA+MGL+   +   DP PLH AA L+INSQ E GDFPQQ I  
Sbjct: 602 KEYVPLEGNRSNLVHTAWALMGLIHAGQAQIDPAPLHLAAKLLINSQTELGDFPQQVIP- 660

Query: 84  VFMKNCM 90
            F+  C+
Sbjct: 661 -FLHACL 666