Jatropha Genome Database

JcCB0601851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0601851.10 + phase: 1 /pseudo/partial
         (85 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30221.m002246 bsu-protein phosphatase, putative                       177   6e-46
29647.m002051 bsu-protein phosphatase, putative                       121   6e-29
30128.m008808 acyl-CoA binding protein, putative                       53   4e-08
30138.m003954 kelch repeat protein, putative                           53   4e-08
30128.m008917 kelch repeat protein, putative                           51   1e-07

>30221.m002246 bsu-protein phosphatase, putative
          Length = 874

 Score =  177 bits (450), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 85/85 (100%), Positives = 85/85 (100%)

Query: 1  LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
          LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 11 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 70

Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
          VLDLTQQRPRWHRVVVQGPGPGPRY
Sbjct: 71 VLDLTQQRPRWHRVVVQGPGPGPRY 95


>29647.m002051 bsu-protein phosphatase, putative
          Length = 885

 Score =  121 bits (304), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 69/85 (81%)

Query: 1   LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
           LAG T  VH YDVLT KW+R+ P GEPP+PRAAH A AVGTMVV QGGIGPAG S +DL+
Sbjct: 70  LAGVTNSVHSYDVLTRKWTRMRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLY 129

Query: 61  VLDLTQQRPRWHRVVVQGPGPGPRY 85
           VLDLT  + +WHRVVVQG GPGPRY
Sbjct: 130 VLDLTNDKFKWHRVVVQGQGPGPRY 154


>30128.m008808 acyl-CoA binding protein, putative
          Length = 675

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 1   LAGATAD------VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL 54
           +AG T D      V  +D+ T  WS +  +G+PP  R     T VGT +VI GG      
Sbjct: 261 IAGHTKDPSEYMQVKVFDLQTRTWSTLKTYGKPPVSRGGQSVTLVGTSLVIFGGQDAKRS 320

Query: 55  SAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 84
              DLH+LDL      W  +   G  P PR
Sbjct: 321 LLNDLHILDLESM--TWDEIDAVGVPPSPR 348



 Score = 49.7 bits (117), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 7   DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 66
           D+H  D+ +  W  I   G PP+PR+ H A       ++  G G       DLHVLD   
Sbjct: 324 DLHILDLESMTWDEIDAVGVPPSPRSDHAAAVHAERYILIFGGGSHATCFNDLHVLD--S 381

Query: 67  QRPRWHRVVVQGPGPGPR 84
           +   W R   QG  P PR
Sbjct: 382 KNMEWTRPTQQGKLPSPR 399


>30138.m003954 kelch repeat protein, putative
          Length = 556

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 5   TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSA-EDLHVLD 63
           T  VH +D  T  WS+    G PPTPR +H  T VG  + + GG    G++  +DLH+LD
Sbjct: 49  TNQVHVFDTATQTWSQPVIKGTPPTPRDSHSCTTVGDSLYVFGGTD--GMNPLKDLHILD 106

Query: 64  LTQQRPRWHRVVVQGPGPGPR 84
                  W    V+G GP  R
Sbjct: 107 TLSH--TWIAPAVRGEGPEAR 125


>30128.m008917 kelch repeat protein, putative
          Length = 616

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 7   DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG-TMVVIQGGIGPAGLS-AEDLHVLDL 64
           D+H  D++T +W +    G PP PR +H AT +G   ++I GG G    +   DLHVLDL
Sbjct: 105 DLHILDLVTKEWIQPECKGTPPCPRESHTATLIGDDRILIFGGSGEGEANYLNDLHVLDL 164

Query: 65  TQQRPRWHRVVVQGPGPGPR 84
                RW    V+G  P PR
Sbjct: 165 KTM--RWSSPEVKGDIPVPR 182