Jatropha Genome Database

JcCB0600521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0600521.10 - phase: 0 /pseudo/partial
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014232 Nitric-oxide synthase, putative                         315   9e-87

>30147.m014232 Nitric-oxide synthase, putative
          Length = 567

 Score =  315 bits (808), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 163/180 (90%), Positives = 171/180 (95%), Gaps = 1/180 (0%)

Query: 37  VNMTVACCYGCGAPLQTLDQEAPGYVLPETYELKKRHRQLRTVLCGRCKLLSHGHMITAV 96
           VN  V CCYGCGAPLQTLDQEAPGYV P+TYELKKRH QLRTVLCGRCKLLSHGHMITAV
Sbjct: 108 VNSMVVCCYGCGAPLQTLDQEAPGYVQPDTYELKKRHHQLRTVLCGRCKLLSHGHMITAV 167

Query: 97  GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLAGANPIIL 156
           GGNGGY GGKQFVSADELREKLSHLR+E+ L+VKLVDIVDFNGSFLAR+RDLAGANPIIL
Sbjct: 168 GGNGGYSGGKQFVSADELREKLSHLRYERVLVVKLVDIVDFNGSFLARIRDLAGANPIIL 227

Query: 157 VITKVIDLLPKETDLNCVGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVISEIQKEKKG 216
           V+TKV DLLPKETD NC+GDWVVEATTKKKLNVLSVHLTSSKSLVGIAGV+SEIQKEKKG
Sbjct: 228 VVTKV-DLLPKETDFNCIGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVVSEIQKEKKG 286