Jatropha Genome Database

JcCB0597261.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0597261.10 - phase: 0 /partial
         (180 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27894.m000780 conserved hypothetical protein                          215   8e-57

>27894.m000780 conserved hypothetical protein
          Length = 565

 Score =  215 bits (548), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 114/184 (61%), Positives = 127/184 (69%), Gaps = 18/184 (9%)

Query: 1   MAQDLSFSKALTPNVSLFPQRPKTLVLKPQLLFTPSLSHQNASFR----RETRAFAGRSK 56
           +AQDLSFSK L P  S FP+            F P       SF     RE RAFAGRSK
Sbjct: 3   IAQDLSFSKTLNPYFS-FPK------------FLPRSKSHFISFSSPNSREVRAFAGRSK 49

Query: 57  NKQGPRIDLDPGYLXXXXXXXXXXXXXLSESLFYRIKNPHKIHADNFTEEELNLIGLGYD 116
            K G RI+                   L+ES FYR+KNP+K +ADN +E+ELNLIGLGYD
Sbjct: 50  KKSG-RIEGSVELHRKVKRSAQQRSKKLAESFFYRLKNPNKNYADNLSEDELNLIGLGYD 108

Query: 117 RMVRFMEKDDPNLKHPYDWYKYGEFGPYSWRGVVLGDPIAGRFTDERVTLYSEVKDQEEW 176
           RMVRFMEKDDPN+KHPYDWYKYGEFGPYSWRGVV+GDP+ GRFTD+RVTLYSEVKDQEEW
Sbjct: 109 RMVRFMEKDDPNIKHPYDWYKYGEFGPYSWRGVVIGDPVVGRFTDDRVTLYSEVKDQEEW 168

Query: 177 EKIE 180
           EKIE
Sbjct: 169 EKIE 172