Jatropha Genome Database

JcCB0590711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0590711.10 + phase: 0 /partial
         (256 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000267 conserved hypothetical protein                          462   e-131
30131.m006948 conserved hypothetical protein                          232   2e-61

>30040.m000267 conserved hypothetical protein
          Length = 1020

 Score =  462 bits (1189), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 217/231 (93%), Positives = 222/231 (96%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           INKLAAVRINGMVERLQQSQQHIRENVY LFQQ+LSQ+TSLFFNRHIDQIILCCFYGVAK
Sbjct: 747 INKLAAVRINGMVERLQQSQQHIRENVYRLFQQVLSQQTSLFFNRHIDQIILCCFYGVAK 806

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           ISKVNLTFREII+NYRKQPQCKPQVFRSVF+DWSSARHNGRTGQDHVDIITFYNEIFIPA
Sbjct: 807 ISKVNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARHNGRTGQDHVDIITFYNEIFIPA 866

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDGQCPASPKVSPFPSLPDMSPKKVSATHNVYVS 180
           AKPLLVEVGSAG   K S  PEVNNNKDGQCPASPKVSPFPSLPDMSPKKVSA HNVYVS
Sbjct: 867 AKPLLVEVGSAGITVKGSQVPEVNNNKDGQCPASPKVSPFPSLPDMSPKKVSAAHNVYVS 926

Query: 181 PLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRG 231
           PLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNR +RG
Sbjct: 927 PLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRNIRG 977


>30131.m006948 conserved hypothetical protein
          Length = 612

 Score =  232 bits (591), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 119/230 (51%), Positives = 158/230 (68%), Gaps = 20/230 (8%)

Query: 1   INKLAAVRINGMVERLQQSQQHIRENVYHLFQQILSQRTSLFFNRHIDQIILCCFYGVAK 60
           + KL A+R   + ERL+ S+Q  RE VY LFQQIL+QRT+LFFNRH+DQI+LCCFYG+AK
Sbjct: 371 MAKLGAIRTQSIAERLKLSKQ-FREKVYFLFQQILNQRTTLFFNRHMDQIVLCCFYGLAK 429

Query: 61  ISKVNLTFREIIFNYRKQPQCKPQVFRSVFIDWSSARHNGRTGQDHVDIITFYNEIFIPA 120
           +S VNLTF++I  NY KQPQC+ Q+F      WS + ++ R G  + ++ITFYN IF+P+
Sbjct: 430 MSGVNLTFKQIYDNYMKQPQCRSQIF------WSVSGNHERNGGQYAEMITFYNRIFLPS 483

Query: 121 AKPLLVEVGSAGAITKASPTPEVNNNKDGQCPASPKVSPFPSLPDMSPKKVSATHNVYVS 180
            K  L E+      T+    P++ N            S FPSLPD+SPKKVS +HNVY+S
Sbjct: 484 VKSFLEEIHHREPPTQV---PDIKNID----------SAFPSLPDISPKKVSPSHNVYLS 530

Query: 181 PLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVR 230
           P+R SK D L S+ +KSYYA VGES + Y++PSK L+ IN RLN  +KV+
Sbjct: 531 PVRLSKQDDLNSNMTKSYYAFVGESIYPYETPSKQLSDINERLNRTKKVK 580