Jatropha Genome Database
- JcCB0587121.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0587121.10 - phase: 2 /pseudo/partial
(259 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008721 conserved hypothetical protein 205 2e-53
29738.m001041 conserved hypothetical protein 84 7e-17
30167.m000856 conserved hypothetical protein 79 3e-15
29646.m001101 transcription factor, putative 69 1e-12
29646.m001100 transcription factor, putative 69 3e-12
30192.m000545 conserved hypothetical protein 65 3e-11
29693.m001968 conserved hypothetical protein 61 6e-10
30138.m003959 transcription factor, putative 55 4e-08
29905.m000443 transcription factor, putative 53 1e-07
>30174.m008721 conserved hypothetical protein
Length = 315
Score = 205 bits (521), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 157/274 (57%), Gaps = 31/274 (11%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLSSGGIPNYXXX 60
AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLL Q+R AI+KL S G+P+Y
Sbjct: 51 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLIQSRPAIRKLFSTGLPSYSCS 110
Query: 61 XXXXXXXXXXXXXXXXGNDESAAIKATI-----AKGKPSSSSFLNNKGVKKAKTLRKTVF 115
+ AA+ A I +KGK S S +N K K+ K RKT F
Sbjct: 111 VGVAKSASSTSECEDVSGIDEAAV-ANIEGSKNSKGKKPSLSCVNKK--KRPKASRKTAF 167
Query: 116 HPLXXXXXXXXXXXXXXXXXXKLWNRK-LDESKPCEEGRDQELNQL------SICDQESG 168
HPL K R+ +D C+E +DQELNQL +ESG
Sbjct: 168 HPLAKESREKARARARQRTEEKKRTRRIIDVPNLCQEAKDQELNQLRTWSPFETTGEESG 227
Query: 169 NNTI---NNPSLIMQLAHEVEAP-SSHGQDHHPLVTIANTTTAESMNMIDDSLVIMEKWN 224
+ NNPS+ M LA EAP SSH Q LVT + MIDDSLVIM KW+
Sbjct: 228 TQSHTMNNNPSMEM-LAEIEEAPISSHVQQQDQLVT--------TEGMIDDSLVIMGKWS 278
Query: 225 PSSPMINYLYNTGMPQE--HQVTDLQSFCXSWEA 256
PS +IN+L+NT +PQE HQ+TDLQSFC SWE
Sbjct: 279 PSF-IINHLFNTSIPQETNHQITDLQSFCKSWEV 311
>29738.m001041 conserved hypothetical protein
Length = 449
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 46/50 (92%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLS 50
AQGPRDRRMRLSL++AR+FFDLQD L FDKASKT++WL ++++AIK+L+
Sbjct: 136 AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIDWLFTKSKAAIKELT 185
>30167.m000856 conserved hypothetical protein
Length = 394
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLS 50
AQG RDRR+RLS+++AR+FFDLQD L FDKASKT+EWLL ++R AIK L+
Sbjct: 104 AQGLRDRRVRLSIEIARKFFDLQDLLGFDKASKTLEWLLSKSRKAIKALA 153
>29646.m001101 transcription factor, putative
Length = 349
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLS 50
A+GPRDRR+RLS A +F+D+QD+L +D+ SK V+WL+ +A+SAI KL+
Sbjct: 32 AKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLA 81
>29646.m001100 transcription factor, putative
Length = 409
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKL 49
A+GPRDRR+RLS A +F+D+QD+L +D+ SK V+WL+ +A+SAI KL
Sbjct: 107 AKGPRDRRVRLSAHTAIDFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKL 155
>30192.m000545 conserved hypothetical protein
Length = 595
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKL 49
A+GPRDRR+RLS A +F+D+QD+L +D+ SK V+WL+ +A++AI +L
Sbjct: 226 AKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDEL 274
>29693.m001968 conserved hypothetical protein
Length = 497
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 1 AQGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLSS--GGIPN 56
++G RDRR+RLS+ A +F+DLQD+L +D+ SK VEWL+ A +I +L S G P+
Sbjct: 101 SKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSINELPSLNGSFPD 158
>30138.m003959 transcription factor, putative
Length = 371
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 2 QGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAIKKLSSGGIP 55
+G RDRR+RLS+ A + +DLQD+L + SK ++WLLD + I KL +P
Sbjct: 63 RGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLPPLQLP 116
>29905.m000443 transcription factor, putative
Length = 377
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 2 QGPRDRRMRLSLKVAREFFDLQDKLCFDKASKTVEWLLDQARSAI 46
+G RDRR+RLS+ A + +DLQDKL ++ SK V+WLL+ A+ I
Sbjct: 64 RGLRDRRVRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLNAAKHEI 108