Jatropha Genome Database

JcCB0582281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0582281.10 - phase: 0 
         (84 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013989 rac gtpase, putative                                     86   3e-18
29602.m000209 rac gtpase, putative                                     74   2e-14
29900.m001556 rac gtpase, putative                                     72   4e-14
28962.m000460 rac gtpase, putative                                     72   4e-14
30170.m014385 rac gtpase, putative                                     72   6e-14
29646.m001113 rac gtpase, putative                                     72   7e-14
29912.m005491 rac gtpase, putative                                     70   2e-13
29709.m001184 rac gtpase, putative                                     56   4e-09

>30147.m013989 rac gtpase, putative
          Length = 211

 Score = 86.3 bits (212), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 41/46 (89%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LREDKHYLADHPGL  VTT QGEELRKQIGAAYY+ECSSKTQQ  K
Sbjct: 124 LREDKHYLADHPGLTPVTTTQGEELRKQIGAAYYVECSSKTQQNVK 169


>29602.m000209 rac gtpase, putative
          Length = 198

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 37/46 (80%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK +L DHPG V +TTAQGEELRK IGA  YIECSSKTQQ  K
Sbjct: 122 LRDDKQFLIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVK 167


>29900.m001556 rac gtpase, putative
          Length = 197

 Score = 72.4 bits (176), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 36/46 (78%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK YL DHPG   +TTAQGEELRK IGA  YIECSSKTQQ  K
Sbjct: 122 LRQDKQYLIDHPGATPITTAQGEELRKIIGAITYIECSSKTQQNVK 167


>28962.m000460 rac gtpase, putative
          Length = 197

 Score = 72.4 bits (176), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 36/46 (78%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK +  DHPG V +TTAQGEELRK IGA  YIECSSKTQQ  K
Sbjct: 122 LRDDKQFFVDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVK 167


>30170.m014385 rac gtpase, putative
          Length = 197

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 36/46 (78%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LREDK +  DHPG V +TTAQGEELRK IGA  YIECSSK+QQ  K
Sbjct: 122 LREDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKSQQNVK 167


>29646.m001113 rac gtpase, putative
          Length = 197

 Score = 71.6 bits (174), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 36/46 (78%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+DK YL DHPG   +T AQGEEL+K +GAA YIECSSKTQQ  K
Sbjct: 122 LRDDKQYLIDHPGATPITAAQGEELKKMVGAAVYIECSSKTQQNVK 167


>29912.m005491 rac gtpase, putative
          Length = 209

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/46 (71%), Positives = 37/46 (80%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LR+D+ YLADH     +T+AQGEELRKQIGAA YIECSSKTQQ  K
Sbjct: 122 LRDDRGYLADHMNFNVITSAQGEELRKQIGAAAYIECSSKTQQNVK 167


>29709.m001184 rac gtpase, putative
          Length = 202

 Score = 55.8 bits (133), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 32/46 (69%)

Query: 18  LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
           LRED  +  D+PG   ++  QG EL+KQIGA  Y+ECSSKTQQ  K
Sbjct: 128 LREDGQFHLDYPGACTISREQGIELKKQIGALAYVECSSKTQQNVK 173