Jatropha Genome Database
- JcCB0574741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0574741.10 + phase: 2 /partial
(260 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29742.m001383 WD-repeat protein, putative 398 e-111
28197.m000034 WD-repeat protein, putative 342 1e-94
30068.m002545 WD-repeat protein, putative 312 9e-86
28460.m000081 WD-repeat protein, putative 243 5e-65
30136.m001016 WD-repeat protein, putative 234 4e-62
30025.m000574 WD-repeat protein, putative 195 2e-50
28179.m000477 WD-repeat protein, putative 71 4e-13
29647.m002072 WD-repeat protein, putative 63 1e-10
30093.m000356 ribosome biogenesis protein bop1, putative 51 7e-07
29864.m001463 Angio-associated migratory cell protein, putative 50 8e-07
30131.m007096 WD-repeat protein, putative 50 1e-06
30221.m002234 katanin P80 subunit, putative 50 1e-06
29654.m000305 receptor for activated protein kinase C, putative 50 1e-06
>29742.m001383 WD-repeat protein, putative
Length = 608
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/251 (74%), Positives = 207/251 (82%)
Query: 3 AQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIE 62
A+MVR RSYKKRFKE SALYMGQ++AAHEGSIL MKFSPDGQYLASAGEDGIVR+W V++
Sbjct: 111 AKMVRARSYKKRFKEFSALYMGQDIAAHEGSILAMKFSPDGQYLASAGEDGIVRIWHVLD 170
Query: 63 SERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQ 122
ERS+EF ++ DPS VY N+ SE+VPLHADK K K K+LR S SACV++P K+F
Sbjct: 171 LERSNEFSEIEGDPSFVYLAANNVSELVPLHADKVKKGKLKNLRTRSDSACVVIPPKVFG 230
Query: 123 ISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQ 182
ISEKP+HEFYGH GEVLDLSWSK +LSSSTDKTVRLWQVGCN+CL +FSHNNYVTCVQ
Sbjct: 231 ISEKPVHEFYGHHGEVLDLSWSKKNCLLSSSTDKTVRLWQVGCNQCLHIFSHNNYVTCVQ 290
Query: 183 FNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCR 242
FNPM KVRIW IPGCQVIDWIDITEIVTAVCYRPDGKGLV+GSMTGNCR
Sbjct: 291 FNPMDDDSFISGSIDGKVRIWEIPGCQVIDWIDITEIVTAVCYRPDGKGLVLGSMTGNCR 350
Query: 243 FYDASGMSLFL 253
FYDAS L L
Sbjct: 351 FYDASDNHLQL 361
>28197.m000034 WD-repeat protein, putative
Length = 714
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/252 (63%), Positives = 195/252 (77%)
Query: 2 RAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVI 61
+ Q V+VR KR KELSALY GQ++ AHEGSI TMKFSPDGQYLASAGED +VR+W+V+
Sbjct: 233 KVQRVKVRQSGKRTKELSALYKGQDIQAHEGSIRTMKFSPDGQYLASAGEDRVVRLWRVL 292
Query: 62 ESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIF 121
E ERS+E +IDPS VYFTV+ SE+ PL DKEK +K K LRK S SACV+ P K+F
Sbjct: 293 EDERSNELDIPEIDPSCVYFTVDHLSELKPLFIDKEKTAKLKSLRKTSDSACVVFPPKVF 352
Query: 122 QISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCV 181
+I EKP+HEF+GH+GE+LDLSWSK+ ++LS+S DKTVRLW+VG + CL+VFSH+NYVTCV
Sbjct: 353 RILEKPVHEFHGHKGEILDLSWSKDHHLLSASEDKTVRLWRVGSDHCLRVFSHSNYVTCV 412
Query: 182 QFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNC 241
QFNP+ KVRIW IP CQV+DW DI EIVTAVCY PDG+G +VGS+ GNC
Sbjct: 413 QFNPVDNNYFMSGSIDGKVRIWAIPCCQVVDWTDIKEIVTAVCYHPDGQGGIVGSIEGNC 472
Query: 242 RFYDASGMSLFL 253
RFY+ S L L
Sbjct: 473 RFYNMSDSHLQL 484
>30068.m002545 WD-repeat protein, putative
Length = 743
Score = 312 bits (800), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/242 (63%), Positives = 180/242 (74%), Gaps = 1/242 (0%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
Q V+V KKR KELS+LY GQE AH+GSILTMKFSPDGQYLAS GED +VRVW+VIE
Sbjct: 247 QRVKVHPSKKRSKELSSLYSGQEFLAHDGSILTMKFSPDGQYLASGGEDSVVRVWKVIED 306
Query: 64 ERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQI 123
+R D+F D S VYFT+N SE+ L+ DK K+ K K +S S CVI P K+F++
Sbjct: 307 DRLDQFHIQANDTSCVYFTMNHLSEIASLNVDKMKSEKTKK-HISSDSTCVIFPPKVFRV 365
Query: 124 SEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQF 183
EKP+HEF+GH GEVLDLSWSK +++LSSS DKTVRLWQVGC+RCL+VFSHNNYVTCV F
Sbjct: 366 LEKPLHEFHGHSGEVLDLSWSKKRFLLSSSVDKTVRLWQVGCDRCLRVFSHNNYVTCVDF 425
Query: 184 NPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRF 243
NPM KVRIW + C V+D+ I EIVTAVCYRP GKG +VG+MTGNC F
Sbjct: 426 NPMDDNYFISGSIDGKVRIWEVIRCLVVDYTVIREIVTAVCYRPGGKGGIVGTMTGNCLF 485
Query: 244 YD 245
YD
Sbjct: 486 YD 487
>28460.m000081 WD-repeat protein, putative
Length = 944
Score = 243 bits (621), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 166/255 (65%), Gaps = 14/255 (5%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
+ VRVR Y K FKELSALY QE+ AH GSI +KFS DG+YLASAGED ++ +WQVIE+
Sbjct: 435 ERVRVRQYGKSFKELSALYKSQEIQAHNGSIWCIKFSLDGRYLASAGEDCVIHIWQVIET 494
Query: 64 ERSDEFGRLDID-PSHVYF----TVNSHSEVVPL------HADKEKNSKFKDLRKNSHSA 112
ER G L ID P F T N E L H +K++ + RK+
Sbjct: 495 ERK---GELLIDKPEDGNFNFLLTANGSPEPSLLSPTAEGHYEKKRRGRSSISRKSLSLD 551
Query: 113 CVILPQKIFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVF 172
+++P+ +F +++KPI F GH +VLDLSWSK++++LSSS DKTVRLWQ+ CL++F
Sbjct: 552 HIVVPETVFALTDKPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWQLSSKTCLKIF 611
Query: 173 SHNNYVTCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGL 232
SH++YVTC+QFNP+ KVRIW+IP QV+DW D+ E+VTA CY PDG+G
Sbjct: 612 SHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGA 671
Query: 233 VVGSMTGNCRFYDAS 247
+VGS G+CR Y S
Sbjct: 672 LVGSYKGSCRLYSTS 686
>30136.m001016 WD-repeat protein, putative
Length = 654
Score = 234 bits (596), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 161/248 (64%), Gaps = 22/248 (8%)
Query: 6 VRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESER 65
++V+ KKR E + +YM QE+ AH+G I TMKFSPDGQYLA+ GEDGIVR+WQV
Sbjct: 192 IKVKQNKKRCMEFTGVYMQQELRAHKGFIWTMKFSPDGQYLATGGEDGIVRIWQVT---- 247
Query: 66 SDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISE 125
++ F ++ KE SK RK SH A V++P++IFQ+ E
Sbjct: 248 -------SVNGCQKSFASEDSFDM------KEGKSK----RKMSH-ASVVIPERIFQLEE 289
Query: 126 KPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFNP 185
P+HEFYGH +VLDL+WS + +LSSS DKTVRLWQVG + CL +F H +YVTC+QFNP
Sbjct: 290 SPVHEFYGHSSDVLDLAWSNSNCLLSSSKDKTVRLWQVGSDHCLNIFHHISYVTCIQFNP 349
Query: 186 MXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFYD 245
+ KVRIW + +V+DW+D ++ +A+CY+PDGKG VVGS+TG CRFY+
Sbjct: 350 VNENYFISGSIDGKVRIWGVCEQRVVDWVDAHDVTSAICYQPDGKGFVVGSITGTCRFYE 409
Query: 246 ASGMSLFL 253
ASG L L
Sbjct: 410 ASGNDLQL 417
>30025.m000574 WD-repeat protein, putative
Length = 939
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 157/241 (65%), Gaps = 2/241 (0%)
Query: 6 VRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESER 65
++VR K +KELSAL++ QE+ AH+GSI T+KFSPD ++LAS GED + +W+V E E
Sbjct: 383 MKVRQAGKSYKELSALHLCQEIQAHQGSIWTIKFSPDARFLASGGEDRTIHIWEVQECEI 442
Query: 66 SDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRK-NSHSACVILPQKIFQIS 124
+ P H + T EV L ++K+K K RK N V + + +F +S
Sbjct: 443 M-SLNEGTLTPLHPFSTTPCLGEVPSLASEKKKKKKGSSSRKCNPIPEYVHVSETVFSLS 501
Query: 125 EKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFN 184
+KP+ F GH +VLDLSWS+++ +LSSS DKTVRLW + CL++F+HN+YVTC+QFN
Sbjct: 502 DKPVCSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDMETKSCLKLFAHNDYVTCIQFN 561
Query: 185 PMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFY 244
PM KVRIW+IP Q++DW D+ E+VTAVCY PDG+G ++GS G+CR Y
Sbjct: 562 PMDDNYFISGSLDNKVRIWSIPDRQLVDWTDLHEMVTAVCYTPDGQGALIGSHKGSCRMY 621
Query: 245 D 245
+
Sbjct: 622 N 622
>28179.m000477 WD-repeat protein, putative
Length = 322
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 59/227 (25%)
Query: 23 MGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESERSDEFGRLDIDPSHVYFT 82
+ Q + H+ +I ++KFS DG++LAS+ D ++ Y
Sbjct: 17 LTQTLTGHKRAISSLKFSSDGRFLASSSADKTLKT----------------------YSL 54
Query: 83 VNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGH-RGEVLDL 141
S+ PL P+HEF+GH +G
Sbjct: 55 SPSNPPTSPL---------------------------------TPLHEFHGHEQGVSDVS 81
Query: 142 SWSKNKYILSSSTDKTVRLWQVGCNRCLQVFS-HNNYVTCVQFNPMXXXXXXXXXXXXKV 200
S +++++S+S DKT+RLW V ++ + H NYV CV FNP V
Sbjct: 82 FSSDSRFLVSASDDKTIRLWDVTTGSQIKTLNGHTNYVFCVNFNPQSNMIVSGSFDET-V 140
Query: 201 RIWTIPGCQVIDWIDI-TEIVTAVCYRPDGKGLVVGSMTGNCRFYDA 246
RIW + + + + ++ VTAV + DG +V S G CR +D+
Sbjct: 141 RIWDVKTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 187
>29647.m002072 WD-repeat protein, putative
Length = 318
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 128 IHEFYGHRGEVLDLSWSKNK-YILSSSTDKTVRLWQV----GCNRCLQVFSHNNYVTCVQ 182
+H +GH V DL+WS + YI S+S D+++R+W C + L+ H++ V CV
Sbjct: 63 LHRLFGHSEGVSDLAWSSDSHYICSASDDRSLRIWDARPPFDCLKTLK--GHSDVVFCVN 120
Query: 183 FNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEI-VTAVCYRPDGKGLVVGSMTGNC 241
FNP +RIW + + + I + VT+V + DG +V GS G+C
Sbjct: 121 FNPQSNLIVSGSFDET-IRIWEVKTGRCMSVIRAHSMPVTSVHFNRDGSLIVSGSHDGSC 179
Query: 242 RFYDAS 247
+ ++AS
Sbjct: 180 KIWEAS 185
>30093.m000356 ribosome biogenesis protein bop1, putative
Length = 735
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 130 EFYGHRGEVLDLSW-SKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFNPM 186
E+ GH G V+ +S + +I S S D TVR+W+V RCL+++ V CV +NP+
Sbjct: 392 EYRGHTGAVMSISTEASGAWIASGSNDGTVRIWEVETGRCLRIWELGEAVQCVAWNPL 449
>29864.m001463 Angio-associated migratory cell protein, putative
Length = 471
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 28/166 (16%)
Query: 27 VAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESERSDEFGRLDIDPSHVYFTVNSH 86
+A H ++L++ FSPDG+ LAS D VR+W D+ FT H
Sbjct: 102 IAGHAEAVLSVAFSPDGRQLASGSGDTTVRLW--------------DLSTQTPMFTCTGH 147
Query: 87 SEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPI-HEFYGHRGEVLDLSW-- 143
V A K C PQ + KP + GH+ + +SW
Sbjct: 148 KNWVLCIAWSPDGKYLVSGSKAGELQCWD-PQ-----TGKPFGNPLVGHKKWITGISWEP 201
Query: 144 ----SKNKYILSSSTDKTVRLWQVGCNRC-LQVFSHNNYVTCVQFN 184
+ + +S+S D R+W V +C + + H +TCV++
Sbjct: 202 VHLSAPCRRFVSASKDGDARIWDVSLRKCVISLTGHTLAITCVKWG 247
>30131.m007096 WD-repeat protein, putative
Length = 500
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 120 IFQISEKP--IHEFYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFSHNN 176
+ +SE P + + GH +V D +S N+YI SSS DKTVR+W++ C++V +
Sbjct: 212 VCTVSEPPSVLKQLKGHSKDVTDFDFSSNNQYIASSSMDKTVRVWELSQGLCIRVIYGVS 271
Query: 177 YVTCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGS 236
C++F+P+ ++ ++ ++I +T++ + G+ + G
Sbjct: 272 SQFCIRFHPVNNNFLSAGNENKEITVFNFSTGRIIHKAGFDAKITSMDHDHTGQLIFCGD 331
Query: 237 MTGN 240
G+
Sbjct: 332 GQGS 335
>30221.m002234 katanin P80 subunit, putative
Length = 803
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 26/237 (10%)
Query: 25 QEVAAHEGSILTMKFS-PDGQYLASAGEDGIVRVWQVIE-------SERSDEFGRLDIDP 76
+E AH S+ +K + L + GED V +W + + S + + D
Sbjct: 5 KEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 64
Query: 77 SHVYFTVNSHSEVVPL--------------HADKEKNSKFKDLRKNSHSACVILPQKIFQ 122
S V + S + L H + F + S + KI+
Sbjct: 65 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 124
Query: 123 ISEKP-IHEFYGHRGEVLDLSWSKN-KYILSSSTDKTVRLWQVGCNRCLQVF-SHNNYVT 179
I +K IH + GH V + ++ + ++++S D TV+LW + + L F SH V
Sbjct: 125 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQVQ 184
Query: 180 CVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDI-TEIVTAVCYRPDGKGLVVG 235
C+ F+P V+ W + ++I T V + + PDG+ L+ G
Sbjct: 185 CIDFHPHEFLLATGDSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGRTLLCG 241
>29654.m000305 receptor for activated protein kinase C, putative
Length = 328
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 131 FYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQV--GCNRCLQVF-SHNNYVTCVQFNPM 186
F GH +VL +++S N+ I+S+S D+T++LW C +Q +HN++V+CV+F+P
Sbjct: 101 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHNDWVSCVRFSPN 160
Query: 187 XXXXXXXXXXXXK-VRIWTIPGCQV-IDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFY 244
+ V++W + C++ V V PDG G G +
Sbjct: 161 TLQPTIVSASWDRTVKVWNLTNCKLRCTLAGHGGYVNTVAVSPDGSLCASGGKDGVILLW 220
Query: 245 D-ASGMSLF 252
D A G L+
Sbjct: 221 DLAEGKRLY 229