Jatropha Genome Database

JcCB0573121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0573121.10 + phase: 0 /partial
         (129 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30032.m000457 Nitrilase, putative                                      94   2e-20
29728.m000800 transcription factor, putative                           60   3e-10
30078.m002308 conserved hypothetical protein                           55   1e-08
29929.m004612 transcription factor, putative                           54   3e-08
30131.m007038 transcription factor, putative                           51   1e-07
30174.m008944 conserved hypothetical protein                           51   2e-07
29638.m000529 transcription factor, putative                           50   4e-07
29813.m001457 hypothetical protein                                     49   5e-07
30093.m000364 transcription factor, putative                           48   1e-06
30147.m014152 conserved hypothetical protein                           48   1e-06
30147.m014114 transcription factor, putative                           48   1e-06
30014.m000446 transcription factor, putative                           47   3e-06

>30032.m000457 Nitrilase, putative
          Length = 442

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 8/120 (6%)

Query: 5   QLQPSSENAQSDAKRGKPTRRRFTGDAHVPINKRVRVPAICVPAIFHLKKERGLRSDGDI 64
           Q+QPSS N     +  +P RRR T   H P +KRVR+P ICVPA+ HLK+E GLRSD + 
Sbjct: 7   QVQPSSSNINEPDR--QPQRRRSTA-GHRP-DKRVRIPPICVPAMIHLKQELGLRSDAET 62

Query: 65  IHWLIHELRPELLPAP----KXXXXXXXXXXXXXXXDSVPKPVCMEYLNDDKVASYLPVA 120
           IHWLIH++RP+L+  P    K               D   K  CMEYLN DK  SY P+A
Sbjct: 63  IHWLIHQVRPQLIDPPAKATKPPISHRNRPSCTVLDDFALKTDCMEYLNCDKPISYPPLA 122


>29728.m000800 transcription factor, putative
          Length = 444

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 6   LQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDG 62
           + PS+ N+ + A   KPT ++ + D H  ++   +R+R+PA+C   +F L +E G +SDG
Sbjct: 89  VHPSTSNSNNSALTIKPTTKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 148

Query: 63  DIIHWLIHELRPELLPA 79
           + I WL+ +  P ++ A
Sbjct: 149 ETIEWLLQQAEPAIIAA 165


>30078.m002308 conserved hypothetical protein
          Length = 215

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)

Query: 20  GKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPEL 76
           G+PT    + D H  +N   +RVR+PA+C   IF L +E G RSDG+ I WL+ +  P +
Sbjct: 41  GRPTNS-LSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSI 99

Query: 77  LPA 79
           + A
Sbjct: 100 IAA 102


>29929.m004612 transcription factor, putative
          Length = 302

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 2   EIRQLQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGL 58
           EI+  Q    N   + K+  P +R    D H  ++   +R+R+PA+C   IF L +E G 
Sbjct: 38  EIKDFQIMIANKDDNKKQLAP-KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGH 96

Query: 59  RSDGDIIHWLIHELRPELLPA 79
           +SDG+ I WL+ +  P ++ A
Sbjct: 97  KSDGETIQWLLQQAEPSIIAA 117


>30131.m007038 transcription factor, putative
          Length = 320

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 24  RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R    D H  +    +R+R+PA+C   IF L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 75  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 133


>30174.m008944 conserved hypothetical protein
          Length = 324

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 22  PTRRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLP 78
           P +R  T D H  +    +R+R+PA C   IF L +E G +SDG+ I WL+    P ++ 
Sbjct: 63  PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIA 122

Query: 79  A 79
           A
Sbjct: 123 A 123


>29638.m000529 transcription factor, putative
          Length = 197

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 12/83 (14%)

Query: 4   RQLQPSSENAQSDAK----RGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKER 56
           +Q +P+S ++   +K     GKP + R     H  +N   +R+R+PA+C   IF L +E 
Sbjct: 23  KQAKPNSPDSPKTSKANPVNGKPRKDR-----HSKVNGRDRRIRLPAVCAARIFQLTREL 77

Query: 57  GLRSDGDIIHWLIHELRPELLPA 79
           G ++DG+ I WL+    P ++ A
Sbjct: 78  GNKTDGETIEWLLRVAEPSVIAA 100


>29813.m001457 hypothetical protein
          Length = 420

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 22  PTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLP 78
           P +R  T D H  +    +R+R+PA C   +F L +E G +SDG+ I WL+ +  P ++ 
Sbjct: 63  PPKRTSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIA 122

Query: 79  A 79
           A
Sbjct: 123 A 123


>30093.m000364 transcription factor, putative
          Length = 546

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 25  RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R T D H  ++   +R+R+PA C   +F L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 157 KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLRQAEPAIIAA 214


>30147.m014152 conserved hypothetical protein
          Length = 385

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 25  RRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R + D H  +    +R+R+PA C   IF L +E G +SDG+ I WL+    P ++ A
Sbjct: 89  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEA 146


>30147.m014114 transcription factor, putative
          Length = 401

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 25  RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           R  T D H  ++   +R+R+PA+C   +F L +E G +SDG+ I WL+ +  P ++ A
Sbjct: 91  RTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAA 148


>30014.m000446 transcription factor, putative
          Length = 229

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 36 NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
           +R+R+P IC   +F L +E G +SDG  I WL+ +  P ++ A
Sbjct: 47 GRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA 90