Jatropha Genome Database
- JcCB0569561.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0569561.10 + phase: 2 /partial
(75 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29598.m000460 Auxin-responsive protein IAA16, putative 158 5e-40
29844.m003174 Auxin-responsive protein IAA7, putative 147 8e-37
29883.m001993 Auxin-induced protein AUX28, putative 145 5e-36
29912.m005483 Auxin-responsive protein IAA27, putative 125 5e-30
30146.m003546 Auxin-responsive protein IAA27, putative 119 2e-28
28179.m000461 transcription factor, putative 114 9e-27
29841.m002749 Auxin-responsive protein IAA1, putative 113 2e-26
30170.m013613 Auxin-responsive protein IAA19, putative 102 3e-23
29598.m000461 Auxin-induced protein 22D, putative 93 3e-20
29844.m003175 Auxin-responsive protein IAA4, putative 88 7e-19
29883.m001992 Auxin-induced protein 22E, putative 86 3e-18
30008.m000799 Auxin-responsive protein IAA13, putative 83 2e-17
29841.m002748 Auxin-induced protein AUX22, putative 80 2e-16
29637.m000735 Auxin-responsive protein IAA13, putative 76 3e-15
30146.m003502 Auxin-responsive protein IAA6, putative 64 2e-11
30076.m004546 Auxin-responsive protein IAA20, putative 60 3e-10
29794.m003410 conserved hypothetical protein 58 8e-10
29848.m004617 ATP binding protein, putative 55 1e-08
29927.m000601 hypothetical protein 47 2e-06
>29598.m000460 Auxin-responsive protein IAA16, putative
Length = 257
Score = 158 bits (399), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 73/75 (97%), Positives = 75/75 (100%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMF++SCKRLRIMKGSEA
Sbjct: 183 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVNSCKRLRIMKGSEA 242
Query: 61 IGLAPRAVEKCKNRS 75
IGLAPRAVEKCKNRS
Sbjct: 243 IGLAPRAVEKCKNRS 257
>29844.m003174 Auxin-responsive protein IAA7, putative
Length = 181
Score = 147 bits (372), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 73/75 (97%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
G+QGM DFMNESKL+DLLN SEYVPTYEDKDGDWMLVGDVPWEMF+DSCKRLRIMKGSEA
Sbjct: 107 GTQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 166
Query: 61 IGLAPRAVEKCKNRS 75
IGLAPRA+EKCK+R+
Sbjct: 167 IGLAPRAMEKCKSRT 181
>29883.m001993 Auxin-induced protein AUX28, putative
Length = 244
Score = 145 bits (365), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/75 (86%), Positives = 73/75 (97%)
Query: 1 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
GSQGMKDF+NESKLIDLLNG++YVPTYEDKDGDWMLVGDVPW+MF++SCKRLRIMKG+EA
Sbjct: 170 GSQGMKDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGDVPWKMFVESCKRLRIMKGTEA 229
Query: 61 IGLAPRAVEKCKNRS 75
GLAPRA+EK KNRS
Sbjct: 230 TGLAPRAMEKRKNRS 244
>29912.m005483 Auxin-responsive protein IAA27, putative
Length = 297
Score = 125 bits (314), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 70/77 (90%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G+ +D ++ES+L+DLL+GSEYV TYEDKDGDWMLVGDVPW+MF D+C+RLRIMK S
Sbjct: 221 GSHGVPSRDGLSESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFTDTCRRLRIMKSS 280
Query: 59 EAIGLAPRAVEKCKNRS 75
EAIGLAPRA+EKCKNR+
Sbjct: 281 EAIGLAPRAMEKCKNRN 297
>30146.m003546 Auxin-responsive protein IAA27, putative
Length = 373
Score = 119 bits (299), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G+ +D ++E+ L DLL+GSEYV TYEDKD DWMLVGDVPWEMF ++C+RLRIMKGS
Sbjct: 297 GSHGLPGRDGLSETCLKDLLHGSEYVLTYEDKDSDWMLVGDVPWEMFTETCRRLRIMKGS 356
Query: 59 EAIGLAPRAVEKCKNRS 75
EAIGLAPRA+EKCK+R+
Sbjct: 357 EAIGLAPRAMEKCKSRN 373
>28179.m000461 transcription factor, putative
Length = 382
Score = 114 bits (285), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
Query: 1 GSQGM--KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGS 58
GS G ++ ++ESKL DLLNGSEY TYEDKDGDWMLVGDVPWEMFI++CKRL+IMK S
Sbjct: 306 GSHGAPEREKLSESKLRDLLNGSEYALTYEDKDGDWMLVGDVPWEMFIETCKRLKIMKSS 365
Query: 59 EAIGLAPRAVEKCK 72
+AIGLAPRA+EK K
Sbjct: 366 DAIGLAPRAMEKFK 379
>29841.m002749 Auxin-responsive protein IAA1, putative
Length = 217
Score = 113 bits (282), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 60/71 (84%)
Query: 5 MKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
+++++NE K++D +NG EYVPTYEDKDGDWM+VGDVPW MF++SCKRLR+MK SEA GLA
Sbjct: 146 IRNYLNERKIMDQVNGVEYVPTYEDKDGDWMMVGDVPWTMFVESCKRLRLMKSSEATGLA 205
Query: 65 PRAVEKCKNRS 75
PR KC + S
Sbjct: 206 PRTPSKCSSSS 216
>30170.m013613 Auxin-responsive protein IAA19, putative
Length = 374
Score = 102 bits (255), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 6 KDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGL 63
++ ++ESKL DLL+GSEYV TYEDKDGDWMLVGDVPWEMF D+CKRLRIMK S+AIGL
Sbjct: 293 REMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCKRLRIMKSSDAIGL 350
>29598.m000461 Auxin-induced protein 22D, putative
Length = 200
Score = 92.8 bits (229), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 44/45 (97%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGL 63
NGSE+VPTYEDKDGDWMLVGDVPW+MFI+SCKRLRIMKGSEA GL
Sbjct: 152 NGSEFVPTYEDKDGDWMLVGDVPWDMFINSCKRLRIMKGSEARGL 196
>29844.m003175 Auxin-responsive protein IAA4, putative
Length = 191
Score = 88.2 bits (217), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 20 GSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
GSEY PTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GL
Sbjct: 144 GSEYAPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEARGLG 188
>29883.m001992 Auxin-induced protein 22E, putative
Length = 196
Score = 86.3 bits (212), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 41/46 (89%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
NGS+Y PTYEDKDGDWMLVGDVPW MFI SCKRLRI+KGSE GL+
Sbjct: 149 NGSDYAPTYEDKDGDWMLVGDVPWGMFISSCKRLRIVKGSEGRGLS 194
>30008.m000799 Auxin-responsive protein IAA13, putative
Length = 318
Score = 83.2 bits (204), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Query: 12 SKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLAPRAVEK 70
SKL+D SE+V TYEDK+GDWMLVGDVPW MF+ S KRLRIM+ SEA GLAPR E+
Sbjct: 253 SKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQER 309
>29841.m002748 Auxin-induced protein AUX22, putative
Length = 194
Score = 79.7 bits (195), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 38/42 (90%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
+ S+YVP YEDKDGDWMLVGDVPWEMF +SCKRLRIMK SEA
Sbjct: 133 DSSDYVPIYEDKDGDWMLVGDVPWEMFTESCKRLRIMKRSEA 174
>29637.m000735 Auxin-responsive protein IAA13, putative
Length = 300
Score = 76.3 bits (186), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 17 LLNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
LL+GS E+V TYEDK+GDWMLVGDVPW MF+ S KRLRIM+ SEA GL
Sbjct: 249 LLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEATGLG 297
>30146.m003502 Auxin-responsive protein IAA6, putative
Length = 320
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 11 ESKLIDLLNGS-EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEAIGLA 64
E + +L+GS EY YED +GD MLVGDVPW MF+ + KRLR++K SE L+
Sbjct: 264 EKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>30076.m004546 Auxin-responsive protein IAA20, putative
Length = 175
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 23 YVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKG 57
+V TYEDK+GDW++VGDVPWEMF+ S KRL+I K
Sbjct: 139 HVLTYEDKEGDWLIVGDVPWEMFLSSVKRLKITKA 173
>29794.m003410 conserved hypothetical protein
Length = 367
Score = 58.2 bits (139), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 22 EYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSE 59
EY YED +GD +LVGDVPW MF+ + KRLR++K SE
Sbjct: 294 EYTLVYEDSEGDRILVGDVPWHMFVSTAKRLRVLKSSE 331
>29848.m004617 ATP binding protein, putative
Length = 895
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 29/36 (80%)
Query: 21 SEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMK 56
+ Y TY+DKDGDW+L GDVPW+ F++S +RL +++
Sbjct: 193 TNYTLTYQDKDGDWLLAGDVPWQTFMESVQRLELVR 228
>29927.m000601 hypothetical protein
Length = 250
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 19 NGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 60
N + Y Y+D++GDW+L DV W FI S +RL++MK + +
Sbjct: 205 NSTTYRLAYQDREGDWLLADDVSWRSFIGSVQRLKLMKNNNS 246