Jatropha Genome Database

JcCB0555631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0555631.10 - phase: 1 /pseudo/partial
         (290 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29869.m001185 hypothetical protein                                    243   6e-65
29869.m001184 transcription factor, putative                          240   5e-64
29869.m001187 hypothetical protein                                    195   2e-50
29869.m001189 hypothetical protein                                    126   1e-29
29631.m001025 hypothetical protein                                     75   3e-14

>29869.m001185 hypothetical protein
          Length = 593

 Score =  243 bits (621), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 133/192 (69%), Positives = 151/192 (78%), Gaps = 13/192 (6%)

Query: 86  GLMGDSMIYVPWFPKFLI-LQDELKEHSDDEDG-KNGNQSNIPSETLSQNGGLGNGFQAG 143
            ++GD++ +V    K    L++EL+EHSDD+ G KNG  +NIP E L+Q+GG+ NGF  G
Sbjct: 379 SILGDAIEFVKELQKQAKELENELEEHSDDDQGVKNGIHNNIPQEILNQDGGIVNGFHVG 438

Query: 144 ASEV-SCPKLNQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALD 202
           +SEV SC KLN  KSE  HDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGF++LMEALD
Sbjct: 439 SSEVVSCSKLNH-KSETSHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFMKLMEALD 497

Query: 203 SLGLEVTNVNVTSCRGLVSNVFKVEKKDSEMVQAD-----YVRNSLLELTRDHPRGWP-- 255
            LGLEVTN NVTS RGLVSNVFKVEKKDSEMVQAD      VR SLLELTRD PRGWP  
Sbjct: 498 CLGLEVTNANVTSFRGLVSNVFKVEKKDSEMVQADXXXXXXVRESLLELTRDAPRGWPEM 557

Query: 256 --ASDNGNGMDY 265
             AS+NG+ MDY
Sbjct: 558 AKASENGSAMDY 569


>29869.m001184 transcription factor, putative
          Length = 576

 Score =  240 bits (613), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 130/186 (69%), Positives = 146/186 (78%), Gaps = 8/186 (4%)

Query: 87  LMGDSMIYVPWFPKFLI-LQDELKEHSDDED-GKNGNQSNIPSETLSQNGGLGNGFQAGA 144
           ++GD++ +V    K    LQDEL+EHSDD+   KNG  +NIP E L+QNGG+ NGF  G+
Sbjct: 370 ILGDAIEFVKELQKQAKELQDELEEHSDDDQVAKNGIHNNIPQEMLNQNGGIVNGFLVGS 429

Query: 145 SEV-SCPKLNQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDS 203
           SEV  C KLN  K E  HDKGQQMEVQVEVAQIDGN+FFVKVFCEHK GGF++LMEALD 
Sbjct: 430 SEVVCCSKLNH-KPETSHDKGQQMEVQVEVAQIDGNKFFVKVFCEHKTGGFMKLMEALDC 488

Query: 204 LGLEVTNVNVTSCRGLVSNVFKVEKKDSEMVQADYVRNSLLELTRDHPRGWP----ASDN 259
           LGLEVTN NVTS RGLVS VFKVEKKDSEMVQADYVR SLLELTRD PRGWP    AS+ 
Sbjct: 489 LGLEVTNANVTSFRGLVSIVFKVEKKDSEMVQADYVRESLLELTRDPPRGWPEMAKASEI 548

Query: 260 GNGMDY 265
           G+ MDY
Sbjct: 549 GSAMDY 554


>29869.m001187 hypothetical protein
          Length = 163

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/141 (73%), Positives = 114/141 (80%), Gaps = 6/141 (4%)

Query: 130 LSQNGGLGNGFQAGASEV-SCPKLNQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCE 188
           L+QNGG+ NGF  G+SEV SC KLN+ K E  HDKGQQMEVQVEVAQIDGNEFFVKVF E
Sbjct: 2   LNQNGGIVNGFFVGSSEVISCSKLNR-KPETSHDKGQQMEVQVEVAQIDGNEFFVKVFYE 60

Query: 189 HKAGGFVRLMEALDSLGLEVTNVNVTSCRGLVSNVFKVEKKDSEMVQADYVRNSLLELTR 248
           HK  GF++LMEALD LGLE TN NVTS RGLVSNVFKVEKKD++MVQA+Y R SLLELTR
Sbjct: 61  HKTRGFMKLMEALDCLGLEATNANVTSFRGLVSNVFKVEKKDNKMVQANYARGSLLELTR 120

Query: 249 DHPRGWP----ASDNGNGMDY 265
           D  RGWP     S+ G+ MDY
Sbjct: 121 DPLRGWPEMVKVSEIGSAMDY 141


>29869.m001189 hypothetical protein
          Length = 361

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/144 (51%), Positives = 89/144 (61%), Gaps = 38/144 (26%)

Query: 86  GLMGDSMIYVPWFPKFLI-LQDELKEHSDDEDG-KNGNQSNIPSETLSQNGGLGNGFQAG 143
            ++GD++ +V    K    L++EL+EHSDD+ G KNG  +NIP ETL+Q+G         
Sbjct: 224 SILGDAIEFVKELQKQAKELENELEEHSDDDQGVKNGIHNNIPQETLNQDG--------- 274

Query: 144 ASEVSCPKLNQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDS 203
                                      V+VAQIDGNEFFVKVFCEHKAG F++LMEALD 
Sbjct: 275 ---------------------------VDVAQIDGNEFFVKVFCEHKAGRFMKLMEALDC 307

Query: 204 LGLEVTNVNVTSCRGLVSNVFKVE 227
           LGLEVTN NVTS RGLVSNVFKVE
Sbjct: 308 LGLEVTNANVTSFRGLVSNVFKVE 331


>29631.m001025 hypothetical protein
          Length = 472

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 153 NQQKSENFHDKGQQMEVQVEVAQIDGNEFFVKVFCEHKAGGFVRLMEALDSLGLEVTNVN 212
           N + S  F +K +++EVQ+EV QI   EF +K+FCE K GGF RLM+A+ SLGL+V + N
Sbjct: 394 NNEDSSGFGEK-EKIEVQIEVNQIGKREFLIKLFCEKKRGGFGRLMDAIYSLGLQVVDAN 452

Query: 213 VTSCRGLVSNVFKVE 227
           +T+  G V N+ KVE
Sbjct: 453 MTTFNGKVLNILKVE 467