Jatropha Genome Database

JcCB0551851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551851.10 - phase: 0 /partial
         (106 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29854.m001093 aldehyde oxidase, putative                              186   2e-48
29854.m001100 aldehyde oxidase, putative                              177   9e-46
29854.m001090 aldehyde oxidase, putative                               80   2e-16
29854.m001099 aldehyde oxidase, putative                               74   1e-14
30169.m006431 xanthine dehydrogenase, putative                         52   6e-08
29854.m001095 aldehyde oxidase, putative                               48   1e-06

>29854.m001093 aldehyde oxidase, putative
          Length = 1366

 Score =  186 bits (471), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/106 (83%), Positives = 98/106 (92%)

Query: 1   MEEDRTAATGSKNLVFAVNGQRFELSSIDPSTTLLEFLRSDTSFKSVKLSCGEGGCGACI 60
           M+ +R+  + + NLVFAVNG+RFELS+IDPSTTLLEFLRS T FKSVKLSCGEGGCGACI
Sbjct: 1   MDLERSRKSDNHNLVFAVNGKRFELSNIDPSTTLLEFLRSQTPFKSVKLSCGEGGCGACI 60

Query: 61  VLVSKYDPVLDQVEDFTVSSCLTLLCSINGCSITTTEGLGNSKDGF 106
           VL+SKYDPV DQVEDFTVSSCLTLLCSINGCS+TT+EGLGNSKDGF
Sbjct: 61  VLLSKYDPVRDQVEDFTVSSCLTLLCSINGCSVTTSEGLGNSKDGF 106


>29854.m001100 aldehyde oxidase, putative
          Length = 1370

 Score =  177 bits (449), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 86/108 (79%), Positives = 97/108 (89%), Gaps = 2/108 (1%)

Query: 1   MEEDRTAATGSK--NLVFAVNGQRFELSSIDPSTTLLEFLRSDTSFKSVKLSCGEGGCGA 58
           ME+  + AT ++  NL+FAVNG+RFELSS+DPSTTLLEFLR+ T FKSVKLSCGEGGCGA
Sbjct: 1   MEDHESTATETERSNLLFAVNGERFELSSVDPSTTLLEFLRTQTRFKSVKLSCGEGGCGA 60

Query: 59  CIVLVSKYDPVLDQVEDFTVSSCLTLLCSINGCSITTTEGLGNSKDGF 106
           CI L+SKYDP  D+VEDFTVSSCLTLLCSINGCSITT+EGLGNSKDGF
Sbjct: 61  CIALLSKYDPFSDEVEDFTVSSCLTLLCSINGCSITTSEGLGNSKDGF 108


>29854.m001090 aldehyde oxidase, putative
          Length = 56

 Score = 80.1 bits (196), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 44/56 (78%)

Query: 1  MEEDRTAATGSKNLVFAVNGQRFELSSIDPSTTLLEFLRSDTSFKSVKLSCGEGGC 56
          M E+R+ A     LVFA+NG RFELSS+ PSTTLL FLR+DT+FKSVKLSCGE  C
Sbjct: 1  MGEERSKAKEKYQLVFAINGVRFELSSVHPSTTLLHFLRTDTAFKSVKLSCGEDFC 56


>29854.m001099 aldehyde oxidase, putative
          Length = 56

 Score = 73.9 bits (180), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 42/53 (79%)

Query: 1  MEEDRTAATGSKNLVFAVNGQRFELSSIDPSTTLLEFLRSDTSFKSVKLSCGE 53
          MEE++     S +LVFAVNGQRFELSS+  STT+LEFLR+ T FKSVKL CGE
Sbjct: 1  MEEEKEREKNSSSLVFAVNGQRFELSSVISSTTVLEFLRTHTPFKSVKLGCGE 53


>30169.m006431 xanthine dehydrogenase, putative
          Length = 1366

 Score = 52.0 bits (123), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 11  SKNLVFAVNGQRFELSSIDPSTTLLEFLRSDTSFKSVKLSCGEGGCGACIVLVSKYDPVL 70
           +K  +  VNG R  L       TL+E+LR D      KL CGEGGCGAC V+VS YD  L
Sbjct: 14  AKEAILYVNGVRRVLPDGLAHLTLIEYLR-DIGLTGTKLGCGEGGCGACTVMVSYYDRKL 72

Query: 71  DQVEDFTVSSCLTLLCSINGCSITTTEGLGNSKDGF 106
           ++   + +++CL  L S+ G  + T EG+GN K G 
Sbjct: 73  NKCVHYAINACLAPLYSVEGMHVITVEGVGNRKSGL 108


>29854.m001095 aldehyde oxidase, putative
          Length = 1223

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/23 (86%), Positives = 21/23 (91%)

Query: 55 GCGACIVLVSKYDPVLDQVEDFT 77
          GCGAC VL+SKYDP LDQVEDFT
Sbjct: 2  GCGACTVLLSKYDPELDQVEDFT 24