Jatropha Genome Database

JcCB0551561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551561.10 - phase: 0 
         (416 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29662.m000472 Auxin efflux carrier component, putative                671   0.0  
30180.m001064 Auxin efflux carrier component, putative                446   e-125
29816.m000677 Auxin efflux carrier component, putative                446   e-125
27985.m000882 Auxin efflux carrier component, putative                290   7e-79
30128.m009025 conserved hypothetical protein                          187   7e-48
29804.m001502 hypothetical protein                                    111   7e-25
29822.m003474 conserved hypothetical protein                          108   6e-24

>29662.m000472 Auxin efflux carrier component, putative
          Length = 635

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/420 (81%), Positives = 362/420 (86%), Gaps = 20/420 (4%)

Query: 1   MINGKDVYDVIAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
           MI GKD+YDV+AAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS
Sbjct: 1   MITGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITLFSLSTLPNTLVMGIPL 120
           SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSK+GSLEWMITLFSLSTLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKSGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISDQFPETAGSITSFKVDSD 180
           LKAMYG+FSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLIS+QFPETAGSITSF+VDSD
Sbjct: 121 LKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQFPETAGSITSFRVDSD 180

Query: 181 VVSLNGREPLQADAEIGDDGKLHXXXXXXXXXXXXXXFNKSHGL---STMTPRASNLTGV 237
           VVSLNGREPLQADAEIGDDGKLH              FNKS GL   ++MTPRASNLTGV
Sbjct: 181 VVSLNGREPLQADAEIGDDGKLHVVVKRSTASSMVSSFNKSQGLNSITSMTPRASNLTGV 240

Query: 238 EIYSVQSSREPTPRASSFNQTDFYAMLSSKVASPKHGYTNSFQ----GDIFSLQSSKGAT 293
           EIYSVQSSREPTPRASSFNQTDFYAM +SK ASPKHGYTNSFQ    GD++SLQSSKGAT
Sbjct: 241 EIYSVQSSREPTPRASSFNQTDFYAMFASKAASPKHGYTNSFQGSGIGDVYSLQSSKGAT 300

Query: 294 PRTSNFDEE-MLKVNNGK-KTRGARSMSGELFNGYSAYPLPNPMFSGSTGSTGPRKKETN 351
           PRTSNFDEE MLK+NN   K RG RSMSGELFNG   YP PNPMFSGST S G RKKE+ 
Sbjct: 301 PRTSNFDEEMMLKINNNNGKKRGGRSMSGELFNG---YPPPNPMFSGST-SGGMRKKESG 356

Query: 352 GGSVVTPNNSNNKELHMFVWSSSASPVSEGNLRHAVNGSASTDFGLQQETPSLAASRGEN 411
           G         NNKELHMFVWSSSASPVSEGNLRHAVN +AS +FG   ++   AA + EN
Sbjct: 357 G------TMPNNKELHMFVWSSSASPVSEGNLRHAVNRAASIEFG-DIDSSKTAALQNEN 409


>30180.m001064 Auxin efflux carrier component, putative
          Length = 613

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/399 (60%), Positives = 281/399 (70%), Gaps = 38/399 (9%)

Query: 1   MINGKDVYDVIAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
           MI+  D+Y V+ A+VPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1   MISATDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITLFSLSTLPNTLVMGIPL 120
           +N+PYAMNYRFIAAD+LQKV++L  L +W   S  GSLEW ITLFSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYAMNYRFIAADTLQKVIVLFVLAIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPL 120

Query: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISDQFPETAGSITSFKVDSD 180
           LK MYGD SGSLMVQIVVLQ +IWYTLMLF+FEYRGA+LLI +QFP+TAGSI SF+VDSD
Sbjct: 121 LKGMYGDDSGSLMVQIVVLQCIIWYTLMLFLFEYRGARLLIGEQFPDTAGSIISFRVDSD 180

Query: 181 VVSLNGREPLQADAEIGDDGKLHXXXXXXXXXXXXXXFNKSHGLS---TMTPRASNLTGV 237
           ++SL+GREPLQ +AE+G+DGKLH                +SHG +   ++TPR SNLT V
Sbjct: 181 IISLDGREPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGLSLTPRPSNLTNV 240

Query: 238 EIYSVQSSREPTPRASSFNQTDFYAMLSSKVASPKHGYTNSFQGDIFSLQSSKGATPRTS 297
           EIYS+QSSR PTPR SSFN TDFY+M++ K AS           ++   QS+ G  P   
Sbjct: 241 EIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNAS-----------NVSPRQSNFGNLP--- 286

Query: 298 NFDEEMLKVNNGKKTRGARSMSGELFNGYSAYPLPNPMFSGSTGSTGPRKKETNGGSVVT 357
            FDEE    N G    G  S +    NG SAYP P      S G+    KK+ NG     
Sbjct: 287 -FDEE----NGGIGVFGNVSRT----NG-SAYPAPPNAGIFSPGA----KKKANGA---- 328

Query: 358 PNNSNNKELHMFVWSSSASPVSEGNLRHAVNGSASTDFG 396
               N K+LHMFVWSSSASPVSEG +     G    D G
Sbjct: 329 ---ENGKDLHMFVWSSSASPVSEGGIHVFRGGDHGIDLG 364


>29816.m000677 Auxin efflux carrier component, putative
          Length = 646

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/431 (56%), Positives = 294/431 (68%), Gaps = 37/431 (8%)

Query: 1   MINGKDVYDVIAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
           MI GKD+Y V+ A+VPLYVAMILAYGSVRWWKIF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1   MITGKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITLFSLSTLPNTLVMGIPL 120
           +N+PY MN RFIAAD+LQK+++L AL LW   +KNGSLEWMIT+FSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYEMNLRFIAADTLQKIIMLVALGLWTNLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISDQFPETAGSITSFKVDSD 180
           L AMY  ++GSLMVQ+VVLQ +IWYTL+LF+FEYRGAK+LI +QFPETA SI SFKVDSD
Sbjct: 121 LIAMYDKYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180

Query: 181 VVSLNGREPLQADAEIGDDGKLHXXXXXXXXXXXXXXFNKSHG---LSTMTPRASNLTGV 237
           VVSL+GR+ L+ DAEIG+DGKLH                +S G    S +TPR SNLTG 
Sbjct: 181 VVSLDGRDFLETDAEIGNDGKLHVTVRKSNAS------RRSLGPGSFSGLTPRPSNLTGA 234

Query: 238 EIYSVQSSREPTPRASSFNQTDFYAMLSSKVASPKHGYTNSFQGDIFSLQSSKGATPRTS 297
           EIYS+ SSR PTPR S+FN +DFY M+  +   P    +N    D++S+QSS+G TPR S
Sbjct: 235 EIYSLSSSRNPTPRGSNFNTSDFYNMMGVQ-GFPGGRLSNFGPADLYSVQSSRGPTPRPS 293

Query: 298 NFDEEMLKVNNGKKTRGARSMSGELFNGYSA------YPLPNPMFSGSTGS--------T 343
           NF+E    +          ++S   F  Y A      YP PNP FS +  +         
Sbjct: 294 NFEENCAPM---------ATISSPRFGFYPAQTVPTSYPAPNPEFSSTKNTKNQQQQEQQ 344

Query: 344 GPRKKETNGGSVVTPNNSNNKELHMFVWSSSASPVSE---GNLRHAVNGSASTDFGLQQE 400
            P +++    +     N + KELHMFVWSSSASPVS+   GN   A   S  +D G  +E
Sbjct: 345 QPLQQQQQQQNQNNKTNHDAKELHMFVWSSSASPVSDVFGGNDFGAAQQSGRSDQG-AKE 403

Query: 401 TPSLAASRGEN 411
              L A   +N
Sbjct: 404 IRMLVADHPQN 414


>27985.m000882 Auxin efflux carrier component, putative
          Length = 544

 Score =  290 bits (743), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 167/354 (47%), Positives = 220/354 (62%), Gaps = 50/354 (14%)

Query: 1   MINGKDVYDVIAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
           MI   D Y V+ A+VPLY AM++AYGSV+W K+FTP+QCSGINRFVAVFAVP+LSFHFIS
Sbjct: 1   MITADDFYKVMCAMVPLYFAMLVAYGSVKW-KVFTPEQCSGINRFVAVFAVPVLSFHFIS 59

Query: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITLFSLSTLPNTLVMGIPL 120
            N+PY M+ +FI AD+L KV++LA L +W  F  NG L+W+ITLFS++TLPNTLVMGIPL
Sbjct: 60  KNNPYQMDTKFILADTLSKVLVLAVLSVWAIFF-NGGLDWLITLFSVATLPNTLVMGIPL 118

Query: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISDQFP-ETAGSITSFKVDS 179
           L AMYGDF+ SLMVQ+VVLQ +IWYTL+LF+FEYR A LLI  QFP  TA SIT  ++D+
Sbjct: 119 LMAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKTQFPGPTAASITKIELDT 178

Query: 180 DVVSLNGREPLQADAEIGDDGKLHXXXXXXXXXXXXXXFNKSHGLSTMTPRASNLTGVEI 239
           DV+SL+GR+PL+ ++E   +G++                + S     +TPR SNL+  EI
Sbjct: 179 DVISLDGRDPLRTESETDGNGRIRVRIRRSTSSAPDSALSISS--INLTPRPSNLSNAEI 236

Query: 240 YSVQSSREPTPRASSFNQTDFYAMLSSKV----------------------------ASP 271
           +SV +   P P    F+  + +   +                                SP
Sbjct: 237 FSVNT---PAP----FHDYNIHNPNNIYNLYNNNHGGTNNNEIIICNGDLGFGYRSGTSP 289

Query: 272 K-HGYTNSFQGDIFSLQSSKGATPRTSNFDEEMLKVNNGKKTRGARS-MSGELF 323
           +  GY +S   D +SLQ     TPR SNF+ EM  +N        RS ++G+ F
Sbjct: 290 RLSGYASS---DAYSLQP----TPRASNFN-EMDVINAASTPYWVRSPVAGKFF 335


>30128.m009025 conserved hypothetical protein
          Length = 357

 Score =  187 bits (475), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 87/163 (53%), Positives = 116/163 (71%)

Query: 1   MINGKDVYDVIAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
           MI  +DVY VI A+VPLYVA++L YGS+RWWKIFTP+Q   +NR V  F +PL +F F +
Sbjct: 1   MIGWEDVYKVIVAMVPLYVALLLGYGSIRWWKIFTPEQGGAVNRLVCYFTLPLFTFEFTA 60

Query: 61  SNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITLFSLSTLPNTLVMGIPL 120
             DP+ MNY FI AD++ K +I+  L  W  FS  GS  W IT FSLSTL N+LV+G+PL
Sbjct: 61  HVDPFKMNYLFIGADAISKFIIVVVLACWAKFSSKGSYTWSITSFSLSTLTNSLVVGVPL 120

Query: 121 LKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISD 163
           +KAMYG  +  L+VQ  V+Q++IW T++LF+ E+R  +L IS 
Sbjct: 121 MKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRLDISS 163


>29804.m001502 hypothetical protein
          Length = 148

 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 76/137 (55%), Gaps = 22/137 (16%)

Query: 116 MGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISDQFPETAGSITSF 175
           MGIPLL  MY  +  SLMVQ                  YRGAK+LI +QFPETA SI  F
Sbjct: 1   MGIPLLIVMYDKYVDSLMVQ------------------YRGAKMLIMEQFPETAASIVLF 42

Query: 176 KVDSDVVSLNGREPLQADAEIGDDGKLHXXXXXXXXXXXXXXFNKSHGLSTMTPRASNLT 235
           K+DSDVVSL+GR+ L+ DA+IG DGKLH                   GL+      SNLT
Sbjct: 43  KMDSDVVSLDGRDLLETDAKIGSDGKLHVAVRKSKASKRSLGHGSFFGLT----HPSNLT 98

Query: 236 GVEIYSVQSSREPTPRA 252
           G EIY + SS+ PT RA
Sbjct: 99  GAEIYCLSSSQNPTLRA 115


>29822.m003474 conserved hypothetical protein
          Length = 313

 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 45  FVAVFAVPLLSFHFISSNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKNGSLEWMITL 104
           FVA F++PLLSF  IS+N+PY MN + I AD LQK++    L      S  G L W+IT 
Sbjct: 2   FVAKFSIPLLSFQVISNNNPYKMNLKLIFADFLQKLLAALVLLAITKISSRGRLNWIITG 61

Query: 105 FSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWY 145
            SLSTLPNTL++GIPLLKAMYG  + +L  QIVVLQS++WY
Sbjct: 62  LSLSTLPNTLILGIPLLKAMYGAEAEALS-QIVVLQSLVWY 101